@inbook {tagspheres2, title = {On the Visualization of Hierarchical Relations and Tree Structures with TagSpheres}, booktitle = {Computer Vision, Imaging and Computer Graphics - Theory and Applications}, series = {Communications in Computer and Information Science}, year = {In Press}, publisher = {Springer International Publishing}, organization = {Springer International Publishing}, author = {J{\"a}nicke, Stefan and Gerik Scheuermann} } @conference {947, title = {Chatbot Explorer: Towards an understanding of knowledge bases of chatbot systems}, booktitle = {30th International Conference in Central Europe on Computer Graphics, Visualization and Computer Vision 2022}, year = {2022}, abstract = {A chatbot can automatically process a user{\textquoteright}s request, e.g. to provide a requested information. In doing so, the user starts a conversation with the chatbot and can specify the request by further inquiry. Due to the developments in the field of NLP in recent years, algorithmic text comprehension has been significantly improved. As a result, chatbots are increasingly used by companies and other institutions for various tasks such as order processes or service requests. Knowledge bases are often used to answer users queries, but these are usually curated manually in various text files, prone to errors. Visual methods can help the expert to identify common problems in the knowledge base and can provide an overview of the chatbot system. In this paper, we present Chatbot Explorer, a system to visually assist the expert to understand, explore, and manage a knowledge base of different chatbot systems. For this purpose, we provide a tree-based visualization of the knowledge base as an overview. For a detailed analysis, the expert can use appropriate visualizations to drill down the analysis to the level of individual elements of a specific story to identify problems within the knowledge base. We support the expert with automatic detection of possible problems, which can be visually highlighted. Additionally, the expert can also change the order of the queries to optimize the conversation lengths and it is possible to add new content. To develop our solution, we have conducted an iterative design process with domain experts and performed two user evaluations. The evaluations and the feedback from our domain experts have shown that our solution can significantly improve the maintainability of chatbot knowledge bases.}, author = {Alrik Hausdorf and Lydia M{\"u}ller and Gerik Scheuermann and Andreas Niekler and Daniel Wiegreffe} } @article {945, title = {An Interactive Decision Support System for Land Reuse Tasks}, journal = {IEEE Computer Graphics and Applications}, volume = {42}, year = {2022}, month = {11/2022}, chapter = {72-83}, issn = {1558-1756}, doi = {10.1109/MCG.2022.3175604}, author = {Yves Annanias and Dirk Zeckzer and Gerik Scheuermann and Daniel Wiegreffe} } @article {946, title = {MDsrv: visual sharing and analysis of molecular dynamics simulations}, journal = {Nucleic Acids Research}, year = {2022}, abstract = {Molecular dynamics simulation is a proven technique for computing and visualizing the time-resolved motion of macromolecules at atomic resolution. The MDsrv is a tool that streams MD trajectories and displays them interactively in web browsers without requiring advanced skills, facilitating interactive exploration and collaborative visual analysis. We have now enhanced the MDsrv to further simplify the upload and sharing of MD trajectories and improve their online viewing and analysis. With the new instance, the MDsrv simplifies the creation of sessions, which allows the exchange of MD trajectories with preset representations and perspectives. An important innovation is that the MDsrv can now access and visualize trajectories from remote datasets, which greatly expands its applicability and use, as the data no longer needs to be accessible on a local server. In addition, initial analyses such as sequence or structure alignments, distance measurements, or RMSD calculations have been implemented, which optionally support visual analysis. Finally, based on Mol*, MDsrv now provides faster and more efficient visualization of even large trajectories compared to its predecessor tool NGL.}, doi = {10.1093/nar/gkac398}, author = {Michelle Kampfrath and Ren{\'e} Staritzbichler and Guillermo P{\'e}rez Hern{\'a}ndez and Alexander S Rose and Johanna K S Tiemann and Gerik Scheuermann and Daniel Wiegreffe and Peter W Hildebrand} } @conference {915, title = {Report on the Correction of Erroneous Geometry Data in Land Reuse Project}, booktitle = {Workshop on Systems to Support Renaturation Projects (SyRePro 2021) }, year = {2021}, abstract = {Land Reuse processes are large planning and decision-making processes based on a large amount of geographic data. Therefore, it is essential that this data is as accurate as possible. However, errors can occur during the creation of the data and not all of them are directly noticeable. We report here what errors we have encountered while working with this geographic data, what problems they can cause, and how we have fixed them. Since the correction can be very time-consuming with the enormous amount of data, we have focused on an automatic correction. Not all of this data can be corrected this way, for the rest, we briefly indicate a procedure to support and simplify the manual correction.}, author = {Yves Annanias and Marc Wahsner and Gerik Scheuermann and Daniel Wiegreffe} } @conference {914, title = {Supporting Land Reuse of Former Open Pit Mining Sites using Text Classification and Active Learning}, booktitle = {Proceedings of the 59th Annual Meeting of the Association for Computational Linguistics and the 11th International Joint Conference on Natural Language Processing (Volume 1: Long Papers)}, year = {2021}, abstract = {Open pit mines left many regions worldwide inhospitable or uninhabitable. Many sites are left behind in a hazardous or contaminated state, show remnants of waste, or have other restrictions imposed upon them, eg, for the protection of human or nature. Such information has to be permanently managed in order to reuse those areas in the future. In this work we present and evaluate an automated workflow for supporting the post-mining management of former lignite open pit mines in the eastern part of Germany, where prior to any planned land reuse, aforementioned information has to be acquired to ensure the safety and validity of such an endeavor. Usually, this information is found in expert reports, either in the form of paper documents, or in the best case as digitized unstructured text{\textemdash}all of them in German language. However, due to the size and complexity of these documents, any inquiry is tedious and time-consuming, thereby slowing down or even obstructing the reuse of related areas. Since no training data is available, we employ active learning in order to perform multi-label sentence classification for two categories of restrictions and seven categories of topics. The final system integrates optical character recognition (OCR), active-learning-based text classification, and geographic information system visualization in order to effectively extract, query, and visualize this information for any area of interest. Active learning and text classification results are twofold: Whereas the restriction categories were reasonably accurate (> 0.85 F1), the seven topic-oriented categories seemed to be complex even for human annotators and achieved {\textellipsis}}, author = {Christopher Schr{\"o}der and Kim B{\"u}rgl and Yves Annanias and Andreas Niekler and Lydia M{\"u}lller and Daniel Wiegreffe and Christian Bender and Christoph Mengs and Gerik Scheuermann and Gerhard Heyer} } @article {846, title = {Analysis of the Near-Wall Flow in a Turbine Cascade by Splat Visualization}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {26}, year = {2020}, month = {08/2019}, pages = {719-728}, abstract = {Turbines are essential components of jet planes and power plants. Therefore, their efficiency and service life are of central engineering interest. In the case of jet planes or thermal power plants, the heating of the turbines due to the hot gas flow is critical. Besides effective cooling, it is a major goal of engineers to minimize heat transfer between gas flow and turbine by design. Since it is known that splat events have a substantial impact on the heat transfer between flow and immersed surfaces, we adapt a splat detection and visualization method to a turbine cascade simulation in this case study. Because splat events are small phenomena, we use a direct numerical simulation resolving the turbulence in the flow as the base of our analysis. The outcome shows promising insights into splat formation and its relation to vortex structures. This may lead to better turbine design in the future.}, doi = {10.1109/TVCG.2019.2934367}, url = {https://ieeexplore.ieee.org/document/8807369}, author = {Baldwin Nsonga and Gerik Scheuermann and Stefan Gumhold and Jordi Ventosa-Molina and Denis Koschichow and Jochen Fr{\"o}hlich} } @article {847, title = {Detection and Visualization of Splat and Antisplat Events in Turbulent Flows}, journal = {IEEE Transactions on Visualization and Computer Graphics}, year = {2020}, month = {05/2019}, pages = {1-1}, abstract = {Splat and antisplat events are a widely found phenomenon in three-dimensional turbulent flow fields. Splats are observed when fluid locally impinges on an impermeable surface transferring energy from the normal component to the tangential velocity components, while antisplats relate to the inverted situation. These events affect a variety of flow properties, such as the transfer of kinetic energy between velocity components and the transfer of heat, so that their investigation can provide new insight into these issues. Here, we propose the first Lagrangian method for the detection of splats and antisplats as features of an unsteady flow field. Our method utilizes the concept of strain tensors on flow-embedded flat surfaces to extract disjoint regions in which splat and antisplat events of arbitrary scale occur. We validate the method with artificial flow fields of increasing complexity. Subsequently, the method is used to analyze application data stemming from a direct numerical simulation of the turbulent flow over a backward facing step. Our results show that splat and antisplat events can be identified efficiently and reliably even in such a complex situation, demonstrating that the new method constitutes a well-suited tool for the analysis of turbulent flows.}, keywords = {Feature extraction, Flow visualization, Visualization techniques and methodologies}, issn = {1077-2626}, doi = {10.1109/TVCG.2019.2920157}, url = {https://ieeexplore.ieee.org/document/8727493}, author = {Baldwin Nsonga and Martin Niemann and Jochen Fr{\"o}hlich and Joachim Staib and Stefan Gumhold and Gerik Scheuermann} } @conference {868, title = {Tensor Spines - A Hyperstreamlines Variant Suitable for Indefinite Symmetric Second-Order Tensors}, booktitle = {IEEE Pacific Visualization Symposium (PacificVis)}, year = {2020}, month = {05/2020}, publisher = {IEEE}, organization = {IEEE}, address = {Tianjin, China}, abstract = {Modern engineering uses optimization to design long-living and robust components. One part of this process is to find the optimal stress-aware design under given geometric constraints and loading conditions. Tensor visualization provides techniques to show and evaluate the stress distribution based on finite element method simulations. One such technique are hyperstreamlines. They allow us to explore the stress along a line following one principal stress direction while showing the other principal stress directions and their values. In this paper, we show shortcomings of this approach from an engineer{\textquoteright}s point of view and propose a variant called tensor spines. It provides an improved perception of the relation between the principal stresses helping engineers to optimize their designs further.}, isbn = {978-1-7281-5697-2}, doi = {https://doi.org/10.1109/PacificVis48177.2020.1008}, url = {https://ieeexplore.ieee.org/abstract/document/9086282}, author = {Vanessa Kretzschmar and Fabian G{\"u}nther and Markus Stommel and Gerik Scheuermann} } @proceedings {880, title = {Visualization Framework for Assisting Interface Optimization of Hybrid Component Design}, volume = {25}, year = {2020}, month = {09/2020}, address = {T{\"u}bingen, Germany}, abstract = {Reliable component design is one of structural mechanics{\textquoteright} main objectives. Especially for lightweight constructions, hybrid parts made of a multi-material combination are used. The design process for these parts often becomes very challenging. The critical section of such hybrid parts is usually the interface layer that often builds the weakest zone. In this paper, we study a hybrid part made of metal and carbon fiber-reinforced composite, where the metal insert is coated by a thermoplastic to decrease the jump in stiffness between the two primary structural materials. To prevent stress peaks in small volumes of the part , mechanical engineers aim to design functional elements at the thermoplastic interface, to homogenize the stress distribution. The placement of such load transmitting functional elements at the thermoplastics interface has a crucial impact on the overall stability and mechanical performance of the design. Resulting from this, mechanical engineers acquire large amounts of simulations outputting multi-field datasets, to examine the impact of differently designed load transmitting elements, their number, and positioning in the interface between metal and composite. In order to assist mechanical engineers in deeper exploration of the often numerous set of simulations, a framework based on visual analytics techniques was developed in close collaboration with engineers. To match their needs, a requirement analysis was performed, and visualizations were discussed steadily. We show how the presented framework helps engineers gaining novel insights to optimize the hybrid component based on the selected load transmitting elements.}, doi = {https://doi.org/10.2312/vmv.20201188}, url = {https://diglib.eg.org/handle/10.2312/vmv20201188}, author = {Vanessa Kretzschmar and Christina Gillmann and Fabian G{\"u}nther and Markus Stommel and Gerik Scheuermann} } @conference {806, title = {Analysis of coupled thermo-hydro-mechanical simulations of a generic nuclear waste repository in clay rock using fiber surfaces}, booktitle = {IEEE Pacific Visualization Symposium (PacificVis 2019)}, year = {2019}, address = {Bangkok}, abstract = {The use of clean and renewable energy and the abandoning of fossil energy have become goals of many national and international energy policies. But even when once accomplished, mankind has to take charge of the relics of the current energy supply system. For example, due to its harmful effects, nuclear waste has to be isolated from the biosphere safely and for sufficiently long times. The geological subsurface is considered as a promising option for the deposition of such by- or end products. In order to investigate the long-term evolution of a repository system, a multiphysics simulation was performed. It combines the structural mechanics of the host rock, the fluid dynamics of formation fluids, and the thermodynamics of all materials resulting in a highly multivariate data set. A visualization of such multiphysics data challenges the current methodology. In this article, we demonstrate how an analysis of a carefully selected subset of the variables in attribute space allows to visualize and interpret the simulation data. We apply a fiber surface extraction algorithm to explore the relationships between these variables. Studying the temporal evolution in attribute space, we found a regionally bulge that could be identified as an effect of the nuclear waste repository because it can be clearly separated from the natural geophysical state prior to waste disposal. Furthermore, we used the extracted fiber surface as a starting point to examine the distribution of other variables inside this area of the physical domain. We conclude this case study with lessons learned from the visualization as well as the geotechnical side.}, author = {Christian Blecha and Felix Raith and Gerik Scheuermann and Thomas Nagel and Olaf Kolditz and Jobst Ma{\ss}mann} } @conference {848, title = {Interlocking Interface Design in Metal-CFRP Joints using a Monte-Carlo Simulation Approach}, booktitle = {22nd International Conference on Composite Materials (ICCM)}, year = {2019}, address = {Melbourne (AUS)}, abstract = {Experimental single lap joint tests with different interlocking structures in the interface area of carbon fiber reinforced plastic and thermoplastic parts motivates an extended simulative study about the influences of interlocking elements. Due to a lack of information from a small number of experimental test with interlocking elements, conclusions are hard to draw about how to place structures elements in multi material joint interface. A Monte-Carlo simulation approach with a large number of simulations is used to provide more general explanations of the effects and interaction within interlocking interface boundaries. The derived conclusions are a wide distribution of pins, a certain pin density, as well as a staggered positioning of pins to achieve a maximum load capacity and minimum damage initiation in the composite for small displacements.}, author = {Fabian G{\"u}nther and Vanessa Kretzschmar and Gerik Scheuermann and Markus Stommel} } @conference {781, title = {Hierarchical Correlation Clustering in Multiple 2D Scalar Fields}, booktitle = {EuroVis 2018, 20th EG/VGTC Conference on Visualization}, year = {2018}, month = {07/2018}, publisher = {Computer Graphics Forum}, organization = {Computer Graphics Forum}, abstract = {Sets of multiple scalar fields can be used to model many types of variation in data, such as uncertainty in measurements and simulations or time-dependent behavior of scalar quantities. Many structural properties of such fields can be explained by dependencies between different points in the scalar field. Although these dependencies can be of arbitrary complexity, correlation, i.e., the linear dependency, already provides significant structural information. Existing methods for correlation analysis are usually limited to positive correlation, handle only local dependencies, or use combinatorial approximations to this continuous problem. We present a new approach for computing and visualizing correlated regions in sets of 2-dimensional scalar fields. This paper describes the following three main contributions: (i) An algorithm for hierarchical correlation clustering resulting in a dendrogram, (ii) a generalization of topological landscapes for dendrogram visualization, and (iii) a new method for incorporating negative correlation values in the clustering and visualization. All steps are designed to preserve the special properties of correlation coefficients. The results are visualized in two linked views, one showing the cluster hierarchy as 2D landscape and the other providing a spatial context in the scalar field{\textquoteright}s domain. Different coloring and texturing schemes coupled with interactive selection support an exploratory data analysis.}, doi = {https://doi.org/10.1111/cgf.13396}, url = {https://onlinelibrary.wiley.com/doi/full/10.1111/cgf.13396}, author = {Tom Liebmann and Gunther H. Weber and Gerik Scheuermann} } @proceedings {803, title = {Optimising Mechanical Interlocking Interface of CFRP-(thermoplastic/metal)-hybrids}, volume = {3}, year = {2018}, pages = {254-260}, publisher = {Deutsche Gesellschaft f{\"u}r Materialkunde e.V. (DGM)}, address = {Bremen, Germany}, abstract = {This contribution is about the experimental and numerical investigation of cfrp thermoplast interface joint strength. In tensile tests the joint strength of lap-shear-joints with cfrp thermoplast hybrid specimens with different surface structures are investigated. Comparing to a smooth reference, pin structures show the highest increase in joint strength up to 500 \%. In FE simulation the optimal geometry for pins is determined to an ellipse. Further, the strengthening effect of pins towards the displacement reduction in joint interface is shown. Here, elliptic pins which are stretched in load direction are found to be most feasible in this application. Finally, three different visualisation techniques are introduced to determine pin{\textquoteright}s position on interface surfaces.}, issn = {978-3-88355-417-4}, url = {https://hybrid2018.dgm.de/fileadmin/Tagungen/2018/2018-04_Hybrid_Materials/02_Druckwerke/2018-Hybrid-Proceedings.pdf}, author = {Fabian G{\"u}nther and Markus Pohl and Markus Stommel and Vanessa Kretzschmar and Gerik Scheuermann} } @proceedings {765, title = {TagPies: Comparative Visualization of Textual Data}, year = {2018}, month = {01/2018}, pages = {40-51}, publisher = {SCITEPRESS Digital Library}, address = {Funchal, Madeira, Portugal}, keywords = {Digital Humanities, Pic Charts, Tag Clouds, TagPies, Text Comparison, Text Visualization}, isbn = {978-989-758-289-9}, doi = {10.5220/0006548000400051}, author = {Stefan J{\"a}nicke and Judith Blumenstein and Michaela R{\"u}cker and Dirk Zeckzer and Gerik Scheuermann} } @article {786, title = {Tensor Field Visualization using Fiber Surfaces of Invariant Space}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {25}, year = {2018}, month = {01/2019}, pages = {1122-1131}, chapter = {1122}, abstract = {Scientific visualization developed successful methods for scalar and vector fields. For tensor fields, however, effective, interactive visualizations are still missing despite progress over the last decades. We present a general approach for the generation of separating surfaces in symmetric, second-order, three-dimensional tensor fields. These surfaces are defined as fiber surfaces of the invariant space, i.e. as pre-images of surfaces in the range of a complete set of invariants. This approach leads to a generalization of the fiber surface algorithm by Klacansky et al. [16] to three dimensions in the range. This is due to the fact that the invariant space is three-dimensional for symmetric second-order tensors over a spatial domain. We present an algorithm for surface construction for simplicial grids in the domain and simplicial surfaces in the invariant space. We demonstrate our approach by applying it to stress fields from component design in mechanical engineering.}, keywords = {fiber surface, Geometry, interaction, invariants, Mechanical engineering, Neuroscience, Strain, Tensile stress, tensor field, Visualization}, issn = {1077-2626}, doi = {10.1109/TVCG.2018.2864846}, url = {https://ieeexplore.ieee.org/document/8447439}, author = {Felix Raith and Christian Blecha and Thomas Nagel and Francesco Parisio and Olaf Kolditz and Fabian G{\"u}nther and Markus Stommel and Gerik Scheuermann} } @conference {722, title = {Coarse-Graining Large Search Landscapes using Massive Edge Collapse}, booktitle = {Topology-Based Methods in Visualization 2017}, year = {2017}, author = {Sebastian Volke and Martin Middendorf and Gerik Scheuermann} } @inbook {703, title = {Comparing Finite-Time Lyapunov Exponents in Approximated Vector Fields}, booktitle = {Topological Methods in Data Analysis and Visualization IV: Theory, Algorithms, and Applications}, year = {2017}, pages = {267-281}, publisher = {Springer International Publishing}, organization = {Springer International Publishing}, issn = {978-3-319-44684-4}, doi = {10.1007/978-3-319-44684-4_16}, author = {Stefan Koch and Sebastian Volke and Gerik Scheuermann and Hans Hagen and Mario Hlawitschka} } @inbook {702, title = {Visualizing Topological Properties of the Search Landscape of Combinatorial Optimization Problems}, booktitle = {Topological Methods in Data Analysis and Visualization IV: Theory, Algorithms, and Applications}, year = {2017}, month = {04/2017}, pages = {69-85}, publisher = {Springer International Publishing}, organization = {Springer International Publishing}, isbn = {ISBN 978-3-319-44684-4}, doi = {10.1007/978-3-319-44684-4_4}, author = {Sebastian Volke and Dirk Zeckzer and Martin Middendorf and Gerik Scheuermann} } @conference {faisal3, title = {AnnotateVis: Combining Traditional Close Reading with Visual Text Analysis}, booktitle = {Workshop on Visualization for the Digital Humanities, IEEE VIS 2016, Baltimore, Maryland, USA}, year = {2016} } @conference {706, title = {Critical Points of Gaussian-Distributed Scalar Fields on Simplicial Grids}, booktitle = {EuroVis 2016, 18th EG/VGTC Conference on Visualization}, year = {2016}, publisher = {Computer Graphics Forum}, organization = {Computer Graphics Forum}, abstract = {Simulations and measurements often result in scalar fields with uncertainty due to errors or output sensitivity estimates. Methods for analyzing topological features of such fields usually are not capable of handling all aspects of the data. They either are not deterministic due to using Monte Carlo approaches, approximate the data with confidence intervals, or miss out on incorporating important properties, such as correlation. In this paper, we focus on the analysis of critical points of Gaussian-distributed scalar fields. We introduce methods to deterministically extract critical points, approximate their probability with high precision, and even capture relations between them resulting in an abstract graph representation. Unlike many other methods, we incorporate all information contained in the data including global correlation. Our work therefore is a first step towards a reliable and complete description of topological features of Gaussian-distributed scalar fields.}, author = {Tom Liebmann and Gerik Scheuermann} } @conference {martin, title = {CTRaCE: Canonical Text Reader and Citation Exporter}, booktitle = {Conference Abstracts of the Digital Humanities 2016}, year = {2016}, keywords = {abstracts}, author = {Reckziegel, Martin and J{\"a}nicke, Stefan and Gerik Scheuermann} } @conference {676, title = {Decomposition of Vector Fields Beyond Problems of First Order and Their Applications}, booktitle = {Topological Methods in Data Analysis and Visualization IV: Theory, Algorithms, and Applications}, year = {2016}, publisher = {Springer}, organization = {Springer}, author = {Wieland Reich and Mario Hlawitschka and Gerik Scheuermann} } @conference {faisal, title = {A Directed Concept Search Environment to Visually Explore Texts Related to User-defined Concept Models}, booktitle = {Proceedings of the 11th Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications}, year = {2016}, pages = {72-83} } @conference {faisal2, title = {Enhancing Close Reading}, booktitle = {Conference Abstracts of the Digital Humanities 2016}, year = {2016} } @article {TVCG-24, title = {Interactive Visual Profiling of Musicians}, journal = {Visualization and Computer Graphics, IEEE Transactions on}, volume = {22}, number = {1}, year = {2016}, month = {Jan}, pages = {200-209}, issn = {1077-2626} } @conference {693, title = {Measuring Event Probabilities in Uncertain Scalar Datasets using Gaussian Processes}, booktitle = {WSCG}, year = {2016}, abstract = {In this paper, we show how the concept of Gaussian process regression can be used to determine potential events in scalar data sets. As a showcase, we will investigate climate data sets in order to identify potential extrem weather events by deriving the probabilities of their appearances. The method is implemented directly on the GPU to ensure interactive frame rates and pixel precise visualizations. We will see, that this approach is especially well suited for sparse sampled data because of its reconstruction properties.}, author = {Steven Schlegel and Sebastian Volke and Gerik Scheuermann} } @conference {tagspheres, title = {TagSpheres: Visualizing Hierarchical Relations in Tag Clouds}, booktitle = {Proceedings of the 11th Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications}, year = {2016}, pages = {15-26} } @conference {tagpies, title = {{\"U}ber die Nutzung von TagPies zur vergleichenden Analyse von Textdaten}, booktitle = {Konferenzabstracts der Digital Humanities im deutschsprachigen Raum 2016}, year = {2016} } @article {survey2, title = {Visual Text Analysis in Digital Humanities}, journal = {Computer Graphics Forum}, year = {2016}, issn = {1467-8659} } @conference {704, title = {Augmented representations of clustered fiber bundles for interactive queries}, booktitle = {iV2015 - 19th International Conference on Information Visualisation}, year = {2015}, month = {07/2015}, publisher = {IEEE}, organization = {IEEE}, address = {Barcelona, Spain}, abstract = {Hierarchical fiber clustering is a promising way to analyze brain connectivity. A disadvantage of hierarchical fiber clustering is its difficult visualization. The simple presentation as a 2D tree is visually too complex because of the amount of several thousand leaves. We present a framework that allows the modification of the dendrogram visualization in a flexible way. The modified dendrogram visualization can convey additional information that grants an easier orientation within the hierarchical clustering. Besides the interaction with the dendrogram itself, it is also possible to make use of a 3D view and a clustering preview. To illustrate potential use cases, we present two usage examples that show the versatility of our framework. }, author = {Stefan Philips and Mario Hlawitschka and Gerik Scheuermann} } @conference {survey, title = {On Close and Distant Reading in Digital Humanities: A Survey and Future Challenges}, booktitle = {Eurographics Conference on Visualization (EuroVis) - STARs}, year = {2015}, publisher = {The Eurographics Association}, organization = {The Eurographics Association} } @conference {648, title = {Clustering Moment Invariants to Identify Similarity within 2D Flow Fields}, booktitle = {EG / VGTC Conference on Visualization, EuroVis 2015 in Cagliari, Italy}, year = {2015}, url = {http://www.informatik.uni-leipzig.de/~bujack/2015EuroVis.pdf}, author = {Roxana Bujack and Jens Kasten and Vijay Natarajan and Gerik Scheuermann and Kenneth I. Joy} } @article {670, title = {Demystification of the geometric Fourier transforms and resulting convolution theorems}, journal = {Mathematical Methods in the Applied Sciences}, year = {2015}, doi = {10.1002/mma.3607}, url = {http://www.informatik.uni-leipzig.de/~bujack/2015Demystification.pdf}, author = {Roxana Bujack and Gerik Scheuermann and Eckhard Hitzer} } @inbook {textreuse, title = {Designing Close and Distant Reading Visualizations for Text Re-use}, booktitle = {Computer Vision, Imaging and Computer Graphics - Theory and Applications}, series = {Communications in Computer and Information Science}, volume = {550}, year = {2015}, pages = {153-171}, publisher = {Springer International Publishing}, organization = {Springer International Publishing}, isbn = {978-3-319-25116-5} } @conference {671, title = {Feature-Based Tensor Field Visualization for Fiber Reinforced Polymers}, booktitle = {IEEE Conference on Scientific Visualization (SciVis)}, year = {2015}, publisher = {IEEE}, organization = {IEEE}, address = {Chicago}, author = {Valentin Zobel and Markus Stommel and Gerik Scheuermann} } @conference {654, title = {Interactive GPU-based Visualization of Scalar Data with Gaussian Distributed Uncertainty}, booktitle = {Vision, Modeling, and Visualization}, year = {2015}, address = {Aachen}, abstract = {We present a GPU-based approach to visualize samples of normally distributed uncertain, three-dimensional scalar data. Our approach uses a mathematically sound interpolation scheme, i.e., Gaussian process regression. The focus of this work is to demonstrate, that GP-regression can be used for interpolation in practice, despite the high computational costs. The potential of our method is demonstrated by an interactive volume rendering of three-dimensional data, where the gradient estimation is directly computed by the field function without the need of additional sample points of the underlying data. We illustrate our method using three-dimensional data sets of the medical research domain.}, author = {Steven Schlegel and Mathias Goldau and Gerik Scheuermann} } @article {649, title = {Moment Invariants for 2D Flow Fields via Normalization in Detail}, journal = {IEEE Transactions on Visualization and Computer Graphics (TVCG)}, volume = {21}, year = {2015}, pages = {916--929}, url = {http://www.informatik.uni-leipzig.de/~bujack/bujackTVCGSmall.pdf}, author = {Roxana Bujack and Ingrid Hotz and Gerik Scheuermann and Eckhard Hitzer} } @conference {647, title = {Moment Invariants for 3D Flow Fields via Normalization}, booktitle = {IEEE Pacific Visualization Symposium, PacificVis 2015 in Hangzhou, China}, year = {2015}, url = {http://www.informatik.uni-leipzig.de/~bujack/PacificVis2015.pdf}, author = {Roxana Bujack and Jens Kasten and Ingrid Hotz and Gerik Scheuermann and Eckhard Hitzer} } @article {628, title = {Topological visual analysis of clusterings in high-dimensional information spaces}, journal = {it - Information Technology}, volume = {57}, year = {2015}, pages = {3-10}, issn = {1611-2776}, doi = {10.1515/itit-2014-1073}, author = {Patrick Oesterling and Patrick J{\"a}hnichen and Gerhard Heyer and Gerik Scheuermann} } @article {DSH-26, title = {TRAViz: A Visualization for Variant Graphs}, journal = {Digital Scholarship in the Humanities}, volume = {30}, number = {suppl 1}, year = {2015}, pages = {i83{\textendash}i99}, publisher = {The Oxford University Press}, issn = {2055-7671} } @proceedings {650, title = {A Visual Method for Analysis and Comparison of Search Landscapes}, year = {2015}, month = {07/2015}, pages = {497--504}, publisher = {ACM}, address = {Madrid, Spain}, doi = {10.1145/2739480.2754733}, author = {Sebastian Volke and Dirk Zeckzer and Gerik Scheuermann and Martin Middendorf} } @conference {rules, title = {5 Design Rules for Visualizing Text Variant Graphs}, booktitle = {Conference Abstracts of the Digital Humanities 2014}, year = {2014} } @inbook {596, title = {Choosing a Tractography Algorithm: On the Effects of Measurement Noise}, booktitle = {Computational Diffusion MRI and Brain Connectivity}, series = {Mathematics and Visualization}, year = {2014}, pages = {115-128}, publisher = {Springer International Publishing}, organization = {Springer International Publishing}, keywords = {Diffusion weighted MRI, Robustness, SNR, tractography}, isbn = {978-3-319-02474-5}, doi = {10.1007/978-3-319-02475-2_11}, url = {http://dx.doi.org/10.1007/978-3-319-02475-2_11}, author = {Andr{\'e} Reichenbach and Mario Hlawitschka and Tittgemeyer, Marc and Gerik Scheuermann}, editor = {Schultz, Thomas and Nedjati-Gilani, Gemma and Venkataraman, Archana and O{\textquoteright}Donnell, Lauren and Panagiotaki, Eleftheria} } @inbook {621, title = {Comparing the Optimization Behaviour of Heuristics with Topology Based Visualization}, booktitle = {Theory and Practice of Natural Computing}, series = {Lecture Notes in Computer Science}, volume = {8890}, year = {2014}, pages = {47-58}, publisher = {Springer International Publishing}, organization = {Springer International Publishing}, keywords = {visualization; fitness landscape; combinatorial optimization problem; barrier landscape; heuristic; optimization behaviour}, issn = {978-3-319-13748-3}, doi = {10.1007/978-3-319-13749-0_5}, url = {http://dx.doi.org/10.1007/978-3-319-13749-0_5}, author = {Simon Bin and Sebastian Volke and Gerik Scheuermann and Martin Middendorf} } @article {607, title = {Customized TRS Invariants for 2D Vector Fields via Moment Normalization}, journal = {Pattern Recognition Letters}, volume = {46}, year = {2014}, pages = {59}, chapter = {46}, doi = {http://dx.doi.org/10.1016/j.patrec.2014.05.005}, url = {http://www.informatik.uni-leipzig.de/~bujack/pat_rec_let.pdf}, author = {Roxana Bujack and Mario Hlawitschka and Gerik Scheuermann and Eckhard Hitzer} } @proceedings {685, title = {Detecting Topologically Relevant Structures in Flows by Surface Integrals}, volume = {22}, year = {2014}, pages = {39-48}, author = {Wieland Reich and Jens Kasten and Gerik Scheuermann} } @conference {601, title = {A Geological Metaphor for Geospatial-temporal Data Analysis}, booktitle = {IVAPP {\textquoteright}14: Proceedings of the 5th International Conference on Information Visualization Theory and Application}, year = {2014}, publisher = {SCITEPRESS}, organization = {SCITEPRESS}, author = {Tom Liebmann and Patrick Oesterling and Stefan J{\"a}nicke and Gerik Scheuermann} } @proceedings {608, title = {Improving the Layout for Text Variant Graphs}, year = {2014}, pages = {41-48}, author = {Stefan J{\"a}nicke and B{\"u}chler, Marco and Gerik Scheuermann} } @conference {589, title = {Moment Invariants for 2D Flow Fields via Normalization}, booktitle = {IEEE Pacific Visualization Symposium, PacificVis 2014 in Yokohama, Japan}, year = {2014}, url = {http://www.informatik.uni-leipzig.de/~bujack/2014PacificVis.pdf}, author = {Roxana Bujack and Ingrid Hotz and Gerik Scheuermann and Eckhard Hitzer} } @proceedings {645, title = {Moment Invariants for 3D Flow Fields}, year = {2014}, url = {http://www.informatik.uni-leipzig.de/~bujack/meinPosterSmall.pdf}, author = {Roxana Bujack and Jens Kasten and Ingrid Hotz and Gerik Scheuermann and Eckhard Hitzer} } @article {611, title = {Optimization strategy for the design of ribbed plastic components}, journal = {Journal of Plastics Technology}, year = {2014}, author = {Marc Sch{\"o}neich and Markus Stommel and Andrea Kratz and Valentin Zobel and Gerik Scheuermann and Ingrid Hotz and Bernhard Burgeth} } @proceedings {554, title = {A Structured Approach for Conducting a Series of Controlled Experiments in Software Visualization}, year = {2014}, month = {01/2014}, pages = {204-209}, address = {Lisbon, Portugal}, doi = {10.5220/0004835202040209}, author = {Richard M{\"u}ller and Pascal Kovacs and Jan Schilbach and Ulrich Eisenecker and Dirk Zeckzer and Gerik Scheuermann} } @conference {590, title = {Tensor Visualization Driven Mechanical Component Design}, booktitle = {In Proc. PacificVis, 2014, IEEE}, year = {2014}, publisher = {IEEE}, organization = {IEEE}, author = {Andrea Kratz and Marc Schoeneich and Valentin Zobel and Ingrid Hotz and Bernhard Burgeth and Gerik Scheuermann and Markus Stommel} } @inbook {630, title = {A Topology-Based Approach to Visualize the Thematic Composition of Document Collections}, booktitle = {Text Mining}, series = {Theory and Applications of Natural Language Processing}, year = {2014}, pages = {63-85}, publisher = {Springer International Publishing}, organization = {Springer International Publishing}, isbn = {978-3-319-12654-8}, doi = {10.1007/978-3-319-12655-5_4}, author = {Patrick Oesterling and Christian Heine and Gunther H. Weber and Gerik Scheuermann}, editor = {Biemann, Chris and Mehler, Alexander} } @conference {envirvis, title = {Utilizing GeoTemCo for Visualizing Environmental Data}, booktitle = {Workshop on Visualisation in Environmental Sciences (EnvirVis)}, year = {2014}, publisher = {The Eurographics Association}, organization = {The Eurographics Association}, isbn = {978-3-905674-66-8} } @inbook {553, title = {Visual Analysis of Discrete Particle Swarm Optimization Using Fitness Landscapes}, booktitle = {Recent Advances in the Theory and Application of Fitness Landscapes}, volume = {6}, number = {Emergence, Complexity and Computation}, year = {2014}, pages = {487 - 507}, publisher = {Springer}, organization = {Springer}, edition = {Hendrik Richter and Andries Engelbrecht}, address = {Berlin, Heidelberg}, issn = {978-3-642-41887-7}, doi = {10.1007/978-3-642-41888-4_17}, url = {http://dx.doi.org/10.1007/978-3-642-41888-4_17}, author = {Sebastian Volke and Simon Bin and Dirk Zeckzer and Martin Middendorf and Gerik Scheuermann} } @conference {602, title = {Visualizations for Text Re-use}, booktitle = {IVAPP {\textquoteright}14: Proceedings of the 5th International Conference on Information Visualization Theory and Application}, year = {2014}, publisher = {SCITEPRESS}, organization = {SCITEPRESS}, author = {Stefan J{\"a}nicke and Ge{\ss}ner, Annette and B{\"u}chler, Marco and Gerik Scheuermann} } @article {eichelbaum2014a, title = {Visualizing Simulated Electrical Fields from Electroencephalography and Transcranial Electric Brain Stimulation: A Comparative Evaluation}, journal = {NeuroImage}, year = {2014}, note = {In Press}, abstract = {Electrical activity of neuronal populations is a crucial aspect of brain activity. This activity is not measured directly but recorded as electrical potential changes using head surface electrodes (electroencephalogram - EEG). Head surface electrodes can also be deployed to inject electrical currents in order to modulate brain activity (transcranial electric stimulation techniques) for therapeutic and neuroscientific purposes. In electroencephalography and noninvasive electric brain stimulation, electrical fields mediate between electrical signal sources and regions of interest (ROI). These fields can be very complicated in structure, and are influenced in a complex way by the conductivity profile of the human head. Visualization techniques play a central role to grasp the nature of those fields because such techniques allow for an effective conveyance of complex data and enable quick qualitative and quantitative assessments. The examination of volume conduction effects of particular head model parameterizations (e.g., skull thickness and layering), of brain anomalies (e.g., holes in the skull, tumors), location and extent of active brain areas (e.g., high concentrations of current densities) and around current injecting electrodes can be investigated using visualization. Here, we evaluate a number of widely used visualization techniques, based on either the potential distribution or on the current-flow. In particular, we focus on the extractability of quantitative and qualitative information from the obtained images, their effective integration of anatomical context information, and their interaction. We present illustrative examples from clinically and neuroscientifically relevant cases and discuss the pros and cons of the various visualization techniques.}, doi = {10.1016/j.neuroimage.2014.04.085}, url = {http://www.sciencedirect.com/science/article/pii/S1053811914003656}, author = {Eichelbaum, Sebastian and Moritz Dannhauer and Mario Hlawitschka and Dana Brooks and Thomas R. Kn{\"o}sche and Gerik Scheuermann} } @article {509, title = {Convolution Products for Hypercomplex Fourier Transforms}, journal = {Journal of Mathematical Imaging and Vision}, volume = {48}, year = {2013}, pages = {606-624}, doi = {10.1007/s10851-013-0430-y}, url = {http://www.informatik.uni-leipzig.de/~bujack/conv-prod.pdf}, author = {Roxana Bujack and Hendrik De Bie and Nele De Schepper and Gerik Scheuermann} } @article {550, title = {Demystification of the Geometric Fourier Transforms}, journal = {AIP Conference Proceedings}, volume = {1558}, year = {2013}, doi = {http://scitation.aip.org/content/aip/proceeding/aipcp/10.1063/1.4825543}, url = {http://www.informatik.uni-leipzig.de/~bujack/demystification.pdf}, author = {Roxana Bujack and Gerik Scheuermann and Eckhard Hitzer} } @article {551, title = {Detection of Outer Rotations on 3D-Vector Fields with Iterative Geometric Correlation and its Efficiency}, journal = {Advances in Applied Clifford Algebras}, year = {2013}, pages = {1-19}, keywords = {Clifford algebra, color image processing, correlation, geometric algebra, iteration, outer rotation, registration}, issn = {0188-7009}, doi = {10.1007/s00006-013-0411-7}, url = {http://www.informatik.uni-leipzig.de/~bujack/outer_reg.pdf}, author = {Roxana Bujack and Gerik Scheuermann and Eckhard Hitzer} } @conference {528, title = {Determining and Visualizing Potential Sources of Floods}, booktitle = {EuroVis Workshop on Visualisation in Environmental Sciences}, year = {2013}, address = {Leipzig}, abstract = {In this paper, we visually analyze spatio-temporal patterns of different hydrologic parameters relevant for flooding. On the basis of data from climate simulations with a high resolution regional atmosphere model, several extreme events are selected for different river catchments in Germany. By visually comparing the spatial distribution of the main contributions to the run-off along with their temporal evolution for a time period in the 20th and the 21th century, impacts of climate change on the hydrological cycle can be identified. }, author = {Steven Schlegel and B{\"o}ttinger, M. and Mario Hlawitschka and Gerik Scheuermann} } @article {527, title = {dPSO-Vis: Topology-based Visualization of Discrete Particle Swarm Optimization}, journal = {Computer Graphics Forum}, volume = {32}, year = {2013}, pages = {351-360}, abstract = {Particle swarm optimization (PSO) is a metaheuristic that has been applied successfully to many continuous and combinatorial optimization problems, e.g., in the fields of economics, engineering, and natural sciences. In PSO a swarm of particles moves within a search space in order to find an optimal solution. Unfortunately, it is hard to understand in detail why and how changes in the design of PSO algorithms affect the optimization behavior. Visualizing the particle states could provide substantially better insight into PSO algorithms, but in case of combinatorial optimization problems, it raises the problem of illustrating the discrete states that cannot easily be embedded spatially. We propose a visualization approach to analyze the optimization problem topologically using a landscape metaphor. Therefore, we transform the configuration space of the optimization problem into a barrier landscape that is topologically equivalent. This visualization is augmented by an illustration of the time-dependent states of the particles. The user of our tool {\textemdash} called dPSO-Vis {\textemdash} is able to analyze the swarm{\textquoteright}s behavior within the search space. We illustrate our approach with a brief analysis of a PSO algorithm that predicts the secondary structure of RNA molecules.}, author = {Sebastian Volke and Martin Middendorf and Mario Hlawitschka and Jens Kasten and Dirk Zeckzer and Gerik Scheuermann} } @article {443, title = {A General Geometric Fourier Transform Convolution Theorem}, journal = {Advances in Applied Clifford Algebras}, volume = {23}, year = {2013}, pages = {15-38}, publisher = {SP Birkh{\"a}user Verlag Basel}, keywords = {Clifford algebra, convolution, coorthogonal, Fourier transform, geometric algebra, geometric trigonometric transform}, issn = {0188-7009}, doi = {10.1007/s00006-012-0338-4}, url = {http://www.informatik.uni-leipzig.de/~bujack/GFTconv.pdf}, author = {Roxana Bujack and Gerik Scheuermann and Eckhard Hitzer} } @inbook {603, title = {GeoTemCo: Comparative Visualization of Geospatial-Temporal Data with Clutter Removal Based on Dynamic Delaunay Triangulations}, booktitle = {Computer Vision, Imaging and Computer Graphics. Theory and Application}, year = {2013}, pages = {160{\textendash}175}, publisher = {Springer}, organization = {Springer}, author = {Stefan J{\"a}nicke and Heine, C. and Gerik Scheuermann} } @proceedings {531, title = {Hierarchical Poisson-Disk Sampling for Fiber Stipples}, year = {2013}, month = {09/2013}, pages = {19-23}, publisher = {Eurographics}, address = {Leipzig}, doi = {10.2312/PE.VMLS.VMLS2013.019-023}, author = {Mario Hlawitschka and Mathias Goldau and Alexander Wiebel and Heine, C. and Gerik Scheuermann} } @proceedings {500, title = {Illustrative Visualization of Cardiac and Aortic Blood Flow from 4D MRI Data}, year = {2013}, pages = {129-136}, address = {Sydney}, isbn = {9781467347990}, author = {Born, Silvia and Markl, Michael and Gutberlet, Matthias and Gerik Scheuermann} } @conference {salz2013improving, title = {Improving Electrical Impedance Tomography Imaging of the Lung with Patient-specific 3D Models}, booktitle = {Visualization in Medicine and Life Sciences}, year = {2013}, pages = {49{\textendash}53}, publisher = {The Eurographics Association}, organization = {The Eurographics Association}, author = {Salz, Peter and Reske, Alexander and Wrigge, H and Gerik Scheuermann and Hans Hagen} } @article {schneider2013interactive, title = {Interactive comparison of multifield scalar data based on largest contours}, journal = {Computer Aided Geometric Design}, volume = {30}, number = {6}, year = {2013}, pages = {521{\textendash}528}, publisher = {Elsevier}, author = {Schneider, D. and Heine, C. and Carr, Hamish and Gerik Scheuermann} } @article {eichelbaum2012a, title = {LineAO {\textendash}- Improved Three-Dimensional Line Rendering}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {19}, number = {3}, year = {2013}, month = {March}, pages = {433-445}, publisher = {IEEE Computer Society}, address = {Los Alamitos, CA, USA}, abstract = {Rendering large numbers of dense line bundles in three dimensions is a common need for many visualization techniques, including streamlines and fiber tractography. Unfortunately, depiction of spatial relations inside these line bundles is often difficult but critical for understanding the represented structures. Many approaches evolved for solving this problem by providing special illumination models or tube-like renderings. Although these methods improve spatial perception of individual lines or related sets of lines, they do not solve the problem for complex spatial relations between dense bundles of lines. In this paper, we present a novel approach that improves spatial and structural perception of line renderings by providing a novel ambient occlusion approach suited for line rendering in real time.}, issn = {1077-2626}, doi = {http://doi.ieeecomputersociety.org/10.1109/TVCG.2012.142}, url = {http://www.informatik.uni-leipzig.de/~ebaum/Publications/eichelbaum2012a/}, author = {Eichelbaum, Sebastian and Mario Hlawitschka and Gerik Scheuermann} } @conference {eichelbaum2013b, title = {OpenWalnut: An Open-Source Tool for Visualization of Medical and Bio-Signal Data}, booktitle = {Biomedical Engineering / Biomedizinische Technik}, year = {2013}, abstract = {The number of medical imaging modalities and bio-signal acquisition methods has increased dramatically in the last years. Each is designed to answer a certain set of questions or to explore certain features of living tissue. With visualization, it is possible to combine these different types of images and data to grasp their meaning in the context of each other. Unfortunately, many existing visualization tools are focused on certain modalities and signals. With OpenWalnut, we provide a tool which is designed to be used with different signals and modalities in combination with each other. It aims at providing interactive rendering and explorability with a clean data-flow-based interface. The project is open-source and well documented and has yet been extended and used by many groups and researchers. In this short-paper, we provide a coarse overview of the principles and focus-points of OpenWalnut.}, doi = {10.1515/bmt-2013-4183}, author = {Eichelbaum, Sebastian and Mario Hlawitschka and Gerik Scheuermann}, editor = {Olaf D{\"o}ssel} } @conference {Philips2013, title = {Parallelized Global Brain Tractography}, booktitle = {Proceedings of the 18th International Fall Workshop on Vision, Modeling, and Visualization (VMV13)}, year = {2013}, pages = {97{\textendash}104}, author = {Stefan Philips and Mario Hlawitschka and Gerik Scheuermann} } @conference {eichelbaum2013a, title = {PointAO - Improved Ambient Occlusion for Point-based Visualization}, booktitle = {Proceedings of the 2013 EG Conference on Visualization}, year = {2013}, abstract = {The visualization of large amounts of particles, glyphs, and other point-based data plays an important role in many fields of science, among them flow mechanics, molecular dynamics, and medical imaging. The proper perception of spatial structures and spatial relatio ns in the data is crucial to the understanding. To accommodate this aspect, we utilize and improve an existing ambient occlusion approach, originally tailored towards line rendering and extend the approach to be applicable to point-based visualizations.}, author = {Eichelbaum, Sebastian and Gerik Scheuermann and Mario Hlawitschka} } @article {CGF:CGF12121, title = {Towards Multifield Scalar Topology Based on Pareto Optimality}, journal = {Computer Graphics Forum}, volume = {32}, number = {3pt3}, year = {2013}, pages = {341{\textendash}350}, publisher = {Blackwell Publishing Ltd}, keywords = {and systems, I.3.5 [Computer Graphics]: Computational Geometry and Object Modeling{\textemdash}Geometric algorithms, languages}, issn = {1467-8659}, doi = {10.1111/cgf.12121}, url = {http://dx.doi.org/10.1111/cgf.12121}, author = {Huettenberger, L. and Heine, C. and Carr, Hamish and Gerik Scheuermann and Garth, C.} } @conference {510, title = {Towards the Extraction of Saddle Periodic Orbits}, booktitle = {TopoInVis 2013}, year = {2013}, author = {Jens Kasten and Jan Reininghaus and Wieland Reich and Gerik Scheuermann} } @article {552, title = {Vector Field Computations in Clifford{\textquoteright}s Geometric Algebra}, journal = {Third SICE Symposium on Computational Intelligence, 2013, Osaka University}, year = {2013}, url = {http://www.informatik.uni-leipzig.de/~bujack/2013Eckhard.pdf}, author = {Eckhard Hitzer and Roxana Bujack and Gerik Scheuermann} } @article {526, title = {Visual Analysis of Cardiac 4D MRI Blood Flow Using Line Predicates}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {19}, year = {2013}, pages = {900-912}, issn = {1077-2626}, doi = {http://doi.ieeecomputersociety.org/10.1109/TVCG.2012.318}, author = {Born, Silvia and Pfeifle, Matthias and Markl, Michael and Gutberlet, Matthias and Gerik Scheuermann} } @article {534, title = {Visualizing nD Point Clouds as Topological Landscape Profiles to Guide Local Data Analysis}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {19}, year = {2013}, pages = {514-526}, issn = {1077-2626}, doi = {http://doi.ieeecomputersociety.org/10.1109/TVCG.2012.120}, author = {Patrick Oesterling and Heine, C. and Weber, G.H. and Gerik Scheuermann} } @article {455, title = {Analysis of Streamline Separation at Infinity Using Time-Discrete Markov Chains}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {18}, year = {2012}, pages = {9}, chapter = {2140}, url = {http://www.informatik.uni-leipzig.de/~reich/vis12.pdf}, author = {Wieland Reich and Gerik Scheuermann} } @inbook { RSH*:2012, title = {Combinatorial Vector Field Topology in Three Dimensions}, booktitle = {Topological Methods in Data Analysis and Visualization II}, year = {2012}, pages = {47-59}, publisher = {Springer}, organization = {Springer}, address = {Berlin, Germany}, url = {http://www.informatik.uni-leipzig.de/~reich/TopoInVisWieland2011.pdf}, author = {Wieland Reich and Schneider, D. and Heine, C. and Alexander Wiebel and Chen, G. and Gerik Scheuermann}, editor = {Ronny Peikert and Hauser, H. and Fuchs, R.} } @conference {604, title = {Comparative Visualization of Geospatial-temporal Data}, booktitle = {GRAPP/IVAPP}, year = {2012}, author = {J{\"a}nicke, Stefan and Heine, C. and Ralf Stockmann and Gerik Scheuermann} } @article {BSH12a, title = {Detection of Outer Rotations on 3D-Vector Fields with Iterative Geometric Correlation}, journal = {5th conference on Applied Geometric Algebras in Computer Science and Engineering}, year = {2012}, address = {La Rochelle, France}, url = {http://www.informatik.uni-leipzig.de/~bujack/outer3D.pdf}, author = {Roxana Bujack and Gerik Scheuermann and Eckhard Hitzer} } @article {BSH12b, title = {Detection of Total Rotations on linear 2D-Vector Fields with Iterative Geometric Correlation}, journal = {AIP Conference Proceedings}, volume = {1493}, year = {2012}, pages = {190-199}, address = {Vienna University of Technology, Austria}, doi = {http://dx.doi.org/10.1007/BF03161244}, url = {http://www.informatik.uni-leipzig.de/~bujack/total2D.pdf}, author = {Roxana Bujack and Gerik Scheuermann and Eckhard Hitzer} } @inbook {eichelbaum2010a, title = {Fabric-Like Visualization of Tensor Field Data on Arbitrary Surfaces in Image Space}, booktitle = {New Developments in the Visualization and Processing of Tensor Fields}, series = {Mathematics and Visualization}, year = {2012}, pages = {71-92}, publisher = {Springer Berlin Heidelberg}, organization = {Springer Berlin Heidelberg}, abstract = {Tensors are of great interest to many applications in engineering and in medical imaging, but a proper analysis and visualization remains challenging. It already has been shown that, by employing the metaphor of a fabric structure, tensor data can be visualized precisely on surfaces where the two eigendirections in the plane are illustrated as thread-like structures. This leads to a continuous visualization of most salient features of the tensor data set. We introduce a novel approach to compute such a visualization from tensor field data that is motivated by image-space line integral convolution (LIC). Although our approach can be applied to arbitrary, non-selfintersecting surfaces, the main focus lies on special surfaces following important features, such as surfaces aligned to the neural pathways in the human brain. By adding a postprocessing step, we are able to enhance the visual quality of the of the results, which improves perception of the major patterns.}, isbn = {978-3-642-27342-1}, doi = {10.1007/978-3-642-27343-8_4}, url = {http://dx.doi.org/10.1007/978-3-642-27343-8_4}, author = {Eichelbaum, Sebastian and Mario Hlawitschka and Bernd Hamann and Gerik Scheuermann}, editor = {Laidlaw, David H. and Vilanova, Anna} } @inbook { WKS:2012, title = {Glyphs for Non-Linear Vector Field Singularities}, booktitle = {Topological Methods in Data Analysis and Visualization II}, year = {2012}, pages = {177-190}, publisher = {Springer}, organization = {Springer}, address = {Berlin, Germany}, author = {Alexander Wiebel and Stefan Koch and Gerik Scheuermann}, editor = {Ronny Peikert and Hauser, H. and Fuchs, R.} } @inbook {eichelbaum2010b, title = {Image-space Tensor Field Visualization Using a LIC-like Method}, booktitle = {Visualization in Medicine and Life Sciences 2}, series = {Mathematics and Visualization}, year = {2012}, pages = {193{\textendash}210}, publisher = {Springer-Verlag}, organization = {Springer-Verlag}, abstract = {Tensors are of great interest to many applications in engineering and in medical imaging, but a proper analysis and visualization remains challenging. Physics-based visualization of tensor fields has proven to show the main features of symmetric second-order tensor fields, while still displaying the most important information of the data, namely the main directions in medical diffusion tensor data using texture and additional attributes using color-coding, in a continuous representation. Nevertheless, its application and usability remains limited due to its computational expensive and sensitive nature. We introduce a novel approach to compute a fabric-like texture pattern from tensor fields motivated by image-space line integral convolution (LIC). Although, our approach can be applied to arbitrary, non-selfintersecting surfaces, we are focusing on special surfaces following neural fibers in the brain. We employ a multi-pass rendering approach whose main focus lies on regaining three-dimensionality of the data under user interaction as well as being able to have a seamless transition between local and global structures including a proper visualization of degenerated points.}, author = {Eichelbaum, Sebastian and Mario Hlawitschka and Bernd Hamann and Gerik Scheuermann}, editor = {Lars Linsen and Bernd Hamann and Hans Hagen and Hege, H.-C.} } @article {431, title = {On the Interpolation of Data with Normally Distributed Uncertainty for Visualization}, journal = {IEEE Transactions on Visualization and Computer Graphics (Proceedings Scientific Visualization / Information Visualization 2012)}, volume = {18}, year = {2012}, month = {2012}, pages = {10}, chapter = {2305}, abstract = {In many fields of science or engineering, we are confronted with uncertain data. For that reason, the visualization of uncertainty received a lot of attention, especially in recent years. In the majority of cases, Gaussian distributions are used to describe uncertain behavior, because they are able to model many phenomena encountered in science. Therefore, in most applications uncertain data is (or is assumed to be) Gaussian distributed. If such uncertain data is given on fixed positions, the question of interpolation arises for many visualization approaches. In this paper, we analyze the effects of the usual linear interpolation schemes for visualization of Gaussian distributed data. In addition, we demonstrate that methods known in geostatistics and machine learning have favorable properties for visualization purposes in this case.}, url = {http://www.informatik.uni-leipzig.de/~schlegel/Paper/2012/Visweek2012/paper.pdf}, author = {Steven Schlegel and Nico Korn and Gerik Scheuermann} } @booklet {eichelbaum2012c, title = {Leading edge vortices of flow over a delta wing.}, year = {2012}, month = {November}, author = {Eichelbaum, Sebastian and Jens Kasten and Mario Hlawitschka and Gerik Scheuermann and Bernd R. Noack} } @conference {631, title = {Topology-based Visualization and Analysis of High-dimensional Data and Time-varying Data at the Extreme Scale}, booktitle = {DOE Exascale Research Conference}, year = {2012}, month = {April}, address = {Portland, OR}, author = {Gunther H. Weber and Dmitriy Morozov and Kenes Beketayev and John Bell and Peer-Timo Bremer and Marc Day and Bernd Hamann and Christian Heine and Maciej Haranczyk and Mario Hlawitschka and Valerio Pascucci and Patrick Oesterling and Gerik Scheuermann} } @conference {435, title = {Tractography in Context: Multimodal Visualization of Probabilistic Tractograms in Anatomical Context}, booktitle = {Visual Computing for Biology and Medicine}, year = {2012}, month = {09/2012}, author = {Anne S. Berres and Mathias Goldau and Tittgemeyer, Marc and Gerik Scheuermann and Hans Hagen} } @inbook { SFR*:2012, title = {A Variance Based FTLE-Like Method for Unsteady Uncertain Vector Fields}, booktitle = {Topological Methods in Data Analysis and Visualization II}, year = {2012}, pages = {255-268}, publisher = {Springer}, organization = {Springer}, address = {Berlin, Germany}, url = {http://www.informatik.uni-leipzig.de/~reich/TopoInVisDominic2011.pdf}, author = {Schneider, D. and Fuhrmann, J. and Wieland Reich and Gerik Scheuermann}, editor = {Ronny Peikert and Hauser, H. and Fuchs, R.} } @conference {481, title = {Visual 4D MRI Blood Flow Analysis with Line Predicates}, booktitle = {IEEE Pacific Visualization}, year = {2012}, abstract = {4D MRI is an in vivo flow imaging modality which has the potential to significantly enhance diagnostics and therapy of cardiovascular diseases. However, current analysis methods demand too much time and expert knowledge in order to apply 4D MRI in the clinics or larger clinical studies. One missing piece are methods allowing to gain a quick overview of the flow data{\textquoteright}s main properties. We present a line predicate approach that sorts precalculated integral lines, which capture the complete flow dynamics, into bundles with similar properties. We introduce several streamline and pathline predicates that allow to structure the flow according to various features useful for blood flow analysis, such as, e.g., velocity distribution, vortices, and flow paths. The user can combine these predicates flexibly and by that create flow structures that help to gain overview and carve out special features of the current dataset. We show the usefulness of our approach by means of a detailed discussion of 4D MRI datasets of healthy and pathological aortas.}, author = {Born, Silvia and Pfeifle, Matthias and Markl, Michael and Gerik Scheuermann} } @inbook {593, title = {A Visual Cross-Database Comparison of Metabolic Networks}, booktitle = {Advances in Visual Computing}, series = {Lecture Notes in Computer Science}, volume = {7432}, year = {2012}, pages = {678-687}, publisher = {Springer Berlin Heidelberg}, organization = {Springer Berlin Heidelberg}, isbn = {978-3-642-33190-9}, doi = {10.1007/978-3-642-33191-6_67}, url = {http://dx.doi.org/10.1007/978-3-642-33191-6_67}, author = {Rohrschneider, M. and Stadler, PeterF. and Gerik Scheuermann}, editor = {Bebis, George and Boyle, Richard and Parvin, Bahram and Koracin, Darko and Fowlkes, Charless and Wang, Sen and Choi, Min-Hyung and Mantler, Stephan and Schulze, J{\"u}rgen and Acevedo, Daniel and Mueller, Klaus and Papka, Michael} } @booklet {eichelbaum2012b, title = {Vue en tractographie d{\textquoteright}un cerveau humain.}, year = {2012}, month = {December}, abstract = {Vue en tractographie d{\textquoteright}un cerveau humain. Cette technique d{\textquoteright}imagerie r{\'e}v{\`e}le la structure des fibres nerveuses - et leurs traumatismes {\'e}ventuels.}, url = {http://www.lemonde.fr/sciences/portfolio/2012/12/27/science_1811032_1650684.html}, author = {Eichelbaum, Sebastian and Mario Hlawitschka and Gerik Scheuermann} } @article { HSC*:2011, title = {Drawing Contour Trees in the Plane}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {17}, number = {11}, year = {2011}, pages = {1599-1611}, author = {Heine, C. and Schneider, D. and Carr, Hamish and Gerik Scheuermann} } @article {490, title = {Extrapolation in the analysis of lung aeration by computed tomography: a validation study.}, journal = {Crit Care}, volume = {15}, year = {2011}, pages = {R279}, abstract = {INTRODUCTION: Computed tomography (CT) is considered the gold standard for quantification of global or regional lung aeration and lung mass. Quantitative CT, however, involves the exposure to ionizing radiation and requires manual image processing. We recently evaluated an extrapolation method which calculates quantitative CT parameters characterizing the entire lung from only ten reference CT-slices thereby reducing radiation exposure and analysis time. We hypothesized that this extrapolation method could be further validated using CT-data from pigs and sheep, which have a different thoracic anatomy. METHODS: We quantified volume and mass of the total lung and differently aerated lung compartments in 168 ovine and 55 porcine whole-lung CTs covering lung conditions from normal to gross deaeration. Extrapolated volume and mass parameters were compared to the respective values obtained by whole-lung analysis. We also tested the accuracy of extrapolation for all possible numbers of CT slices between 15 and 5. Bias and limits of agreement (LOA) were analyzed by the Bland-Altman method. RESULTS: For extrapolation from ten reference slices, bias (LOA) for the total lung volume and mass of sheep were 18.4 (-57.2 to 94.0) ml and 4.2 (-21.8 to 30.2) grams, respectively. The corresponding bias (LOA) values for pigs were 5.1 (-55.2 to 65.3) ml and 1.6 (-32.9 to 36.2) grams, respectively. All bias values for differently aerated lung compartments were below 1\% of the total lung volume or mass and the LOA never exceeded +/-2.5\%. Bias values diverged from zero and the LOA became considerably wider when less than ten reference slices were used. CONCLUSIONS: The extrapolation method appears robust against variations in thoracic anatomy which further supports its accuracy and potential usefulness for clinical and experimental application of quantitative CT.}, issn = {1466609X}, doi = {10.1186/cc10563}, url = {http://www.ncbi.nlm.nih.gov/pubmed/22112625}, author = {Reske, Alexander and Rau, Anna and Reske, Alexander and Koziol, Manja and Gottwald, Beate and Alef, Michaele and Ionita, Jean-Claude and Spieth, Peter and Hepp, Pierre and Seiwerts, Matthias and Beda, Alessandro and Born, Silvia and Gerik Scheuermann and Amato, Marcelo B P and Wrigge, H} } @conference { GWG*:2011, title = {Fiber Stippling: An Illustrative Rendering for Probabilistic Diffusion Tractography}, booktitle = {IEEE BioVis Proceedings}, year = {2011}, pages = {23-30}, abstract = {One of the most promising avenues for compiling anatomical brain connectivity data arises from diffusion magnetic resonance imaging (dMRI). dMRI provides a rather novel family of medical imaging techniques with broad application in clinical as well as basic neuroscience as it offers an estimate of the brain{\textquoteright}s fiber structure completely non-invasively and in vivo. A convenient way to reconstruct neuronal fiber pathways and to characterize anatomical connectivity from this data is the computation of diffusion tractograms. In this paper, we present a novel and effective method for visualizing probabilistic tractograms within their anatomical context. Our illustrative rendering technique, called fiber stippling, is inspired by visualization standards as found in anatomical textbooks. These illustrations typically show slice-based projections of fiber pathways and are typically hand-drawn. Applying the automatized technique to diffusion tractography, we demonstrate its expressiveness and intuitive usability as well as a more objective way to present white-matter structure in the human brain.}, author = {Mathias Goldau and Alexander Wiebel and Nico Stephan Gorbach and Corina Melzer and Mario Hlawitschka and Gerik Scheuermann and Tittgemeyer, Marc} } @conference {BSH11, title = {A General Geometric Fourier Transform}, booktitle = {Proceedings of the 9th International Conference on Clifford Algebras and their Applications}, year = {2011}, address = {Bauhaus-University Weimar, Germany}, url = {http://www.informatik.uni-leipzig.de/~bujack/GeneralGFT.pdf}, author = {Roxana Bujack and Gerik Scheuermann and Eckhard Hitzer}, editor = {K. G{\"u}rlebeck} } @article { URS*:2011, title = {In Silico Evolution of Early Metabolism}, journal = {Artificial Life}, volume = {17}, number = {2}, year = {2011}, pages = {87-108}, author = {Ullrich, A. and Rohrschneider, M. and Gerik Scheuermann and Stadler, PeterF. and Flamm, C.} } @article { OHJ*:2011, title = {Visualization of High-Dimensional Point Clouds Using Their Density Distribution{\textquoteright}s Topology}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {17}, number = {11}, year = {2011}, pages = {1547-1559}, author = {Patrick Oesterling and Heine, C. and J{\"a}nicke, H. and Gerik Scheuermann and Heyer, G.} } @conference { GWH*:2011, title = {Visualizing DTI Parameters on Boundary Surfaces of White Matter Fiber Bundles}, booktitle = {IASTED International Conference on Computer Graphics and Imaging} publisher = {ACTA Press}, year = {2011}, pages = {53-61}, publisher = {ACTA Press}, organization = {ACTA Press}, abstract = {Diffusion magnetic resonance imaging is so far the only medical imaging modality that has the potential for probing anatomical brain connectivity in vivo. Specifically, it provides the data basis for a set of techniques allowing for tracking of fiber bundles in the brain{\textquoteright}s white matter. Furthermore, due to the micro-structural basis of the diffusion process, fiber integrity might be estimated. Typically, this is achieved by tensor-derived parameters, such as by fractional anisotropy (FA), which allows for a quantification of the directionality of local diffusion properties. In neuroscience, such parameterization of the diffusion tensor has greatly stimulated studies of localized brain changes, related to development, aging, or various neurological and psychiatric diseases. However, thus far, there is no satisfactory solution for the visualization and assessment of such parameters along fiber bundles. In this paper, we present a novel technique to visualize changes of tensor-derived parameters along clusters of the trajectories obtained from diffusion tractography. This visualization approach consists of two steps: First, an automatic local aggregation of data values around the trajectories for quantitative analysis and visualization on the fiber bundle boundary and second, a color-coded slice that is intuitively movable along the bundle for interactive exploration of the bundle{\textquoteright}s parameters.}, isbn = {978-0-88986-865-6}, author = {Mathias Goldau and Alexander Wiebel and Mario Hlawitschka and Gerik Scheuermann} } @article { WWS*:2010, title = {Accelerated Streak Line Computation Using Adaptive Refinement}, journal = {Journal of WSCG}, volume = {18}, year = {2010}, pages = {17-23}, author = {Alexander Wiebel and Wang, Q. and Schneider, D. and Gerik Scheuermann} } @inbook { RS:2010, title = {Analyzing Real Vector Fields with Clifford Convolution and Clifford-Fourier Transform}, booktitle = {Geometric Algebra Computing}, year = {2010}, pages = {121-133}, publisher = {Springer}, organization = {Springer}, url = {http://www.informatik.uni-leipzig.de/~reich/cliffordFT.pdf}, author = {Wieland Reich and Gerik Scheuermann}, editor = {Bayro-Corrochano, E. and Gerik Scheuermann} } @article {422, title = {BarMap: RNA Folding on Dynamic Energy Landscapes}, journal = {RNA}, volume = {16}, year = {2010}, pages = {1308-1316}, author = {Ivo L. Hofacker and Flamm, C. and Heine, C. and Wolfinger, M.T. and Gerik Scheuermann and Stadler, PeterF.} } @article { HGT*:2010, title = {Direct Visualization of Fiber Information by Coherence}, journal = {International Journal of Computer Assisted Radiology and Surgery}, volume = {5}, number = {2}, year = {2010}, pages = {125-131}, author = {Mario Hlawitschka and Garth, C. and Tricoche, X. and Kindlmann, G. and Gerik Scheuermann and Joy, K. and Bernd Hamann} } @conference { HTH*:2010, title = {Generating a Visual Overview of Large Diachronic Document Collections based on the Detection of Topic Change}, booktitle = {IMAGAPP/IVAPP}, year = {2010}, pages = {153-156}, publisher = {INSTICC Press}, organization = {INSTICC Press}, author = {Holz, F. and Teresniak, S. and Heyer, G. and Gerik Scheuermann} } @book { BS:2010, title = {Geometric Algebra Computing - in Engineering and Computer Science}, series = {Geometric Algebra Computing}, year = {2010}, publisher = {Springer}, organization = {Springer}, isbn = {978-1-84996-107-3}, editor = {Bayro-Corrochano, E. and Gerik Scheuermann} } @article { BWF*:2010, title = {Illustrative Stream Surfaces}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {16}, number = {6}, year = {2010}, pages = {1329-1338}, author = {Born, Silvia and Alexander Wiebel and Friedrich, Jan and Gerik Scheuermann and Bartz, Dirk} } @article { JS:2010b, title = {Measuring Complexity in Lagrangian and Eulerian Flow Descriptions}, journal = {Computer Graphics Forum}, volume = {29}, number = {6}, year = {2010}, pages = {1783-1794}, author = {J{\"a}nicke, H. and Gerik Scheuermann} } @conference {eichelbaum2010e, title = {OpenWalnut - An Open-Source Visualization System}, booktitle = {Proceedings of the 6th High-End Visualization Workshop}, year = {2010}, month = {December}, pages = {67{\textendash}78}, abstract = {In the last years a variety of open-source software packages focusing on visualization of human brain data have evolved. Many of them are designed to be used in a pure academic environment and are optimized for certain tasks or special data. The open source visualization system we introduce here is called \emph{OpenWalnut}. It is designed and developed to be used by neuroscientists during their research, which enforces the framework to be designed to be very fast and responsive on the one side, but easily extendible on the other side. \emph{OpenWalnut} is a very application-driven tool and the software is tuned to ease its use. Whereas we introduce \emph{OpenWalnut} from a user{\textquoteright}s point of view, we will focus on its architecture and strengths for visualization researchers in an academic environment.}, author = {Eichelbaum, Sebastian and Mario Hlawitschka and Alexander Wiebel and Gerik Scheuermann}, editor = {Werner benger and Andreas Gerndt and Simon Su and Wolfram Schoor and Michael Koppitz and Wolfgang Kapferer and Hans-Peter Bischof and Massimo Di Pierro} } @inbook { WCW*:2010, title = {Topological Flow Structures in a Mathematical Model for Rotation-Mediated Cell Aggregation}, booktitle = {Topological Methods in Data Analysis and Visualization}, year = {2010}, pages = {193-204}, publisher = {Springer}, organization = {Springer}, author = {Alexander Wiebel and Chan, R. and Wolf, C. and Robitzki, A. and Stevens, A. and Gerik Scheuermann}, editor = {Pascucci, V. and Tricoche, X. and Hans Hagen and Tierny, J.} } @article { SRW*:2010, title = {Topology Aware Stream Surfaces}, journal = {Computer Graphics Forum}, volume = {29}, number = {3}, year = {2010}, pages = {1153-1161}, url = {http://www.informatik.uni-leipzig.de/~reich/eurovis2010.pdf}, author = {Schneider, D. and Wieland Reich and Alexander Wiebel and Gerik Scheuermann} } @conference { JS:2010a, title = {Towards Automatic Feature-based Visualization}, booktitle = {Scientific Visualization: Advanced Concepts}, series = {Dagstuhl Follow-Ups}, year = {2010}, pages = {62-77}, publisher = {Schloss Dagstuhl - Leibniz-Zentrum fuer Informatik, Germany}, organization = {Schloss Dagstuhl - Leibniz-Zentrum fuer Informatik, Germany}, author = {J{\"a}nicke, H. and Gerik Scheuermann}, editor = {Hans Hagen} } @conference { HS:2010, title = {Tracking Lines in Higher Order Tensor Fields}, booktitle = {Scientific Visualization: Advanced Concepts}, series = {Dagstuhl Follow-Ups}, year = {2010}, pages = {124-135}, publisher = {Schloss Dagstuhl - Leibniz-Zentrum fuer Informatik, Germany}, organization = {Schloss Dagstuhl - Leibniz-Zentrum fuer Informatik, Germany}, author = {Mario Hlawitschka and Gerik Scheuermann}, editor = {Hans Hagen} } @conference { OST*:2010, title = {Two-stage framework for a topology-based projection and visualization of classified document collections}, booktitle = {IEEE VAST}, year = {2010}, pages = {91-98}, publisher = {IEEE Computer Society}, organization = {IEEE Computer Society}, address = {Los Alamitos, CA, USA}, author = {Patrick Oesterling and Gerik Scheuermann and Teresniak, S. and Heyer, G. and Koch, S. and Ertl, T. and Weber, G.H.} } @conference { WRK*:2010, title = {Vector Field Topology in the Context of Separation and Attachment of Flows}, booktitle = {Foundations of Topological Analysis Workshop}, year = {2010}, note = {Co-located with IEEE VisWeek 2010}, url = {http://www.informatik.uni-leipzig.de/~reich/wiebelworkshop2010.pdf}, author = {Alexander Wiebel and Wieland Reich and Stefan Koch and Gerik Scheuermann} } @article { JS:2010c, title = {Visual Analysis of Flow Features Using Information Theory}, journal = {IEEE Computer Graphics and Applications}, volume = {30}, number = {1}, year = {2010}, pages = {40-49}, author = {J{\"a}nicke, H. and Gerik Scheuermann} } @conference { OHJ:2010, title = {Visual analysis of high dimensional point clouds using topological landscapes}, booktitle = {IEEE Pacific Visualization Symposium PacificVis 2010}, year = {2010}, pages = {113-120}, address = {Los Alamitos, CA, USA}, author = {Patrick Oesterling and Heine, C. and J{\"a}nicke, H. and Gerik Scheuermann}, editor = {North, S. and Shen, H.-W. and van Wijk, J.J} } @conference { RUK*:2010, title = {Visual Network Analysis of Dynamic Metabolic Pathways}, booktitle = {ISVC 2010}, series = {Lecture Notes in Computer Science}, volume = {6453}, year = {2010}, pages = {316-327}, publisher = {Springer}, organization = {Springer}, author = {Rohrschneider, M. and Ullrich, A. and Kerren, Andreas and Stadler, PeterF. and Gerik Scheuermann} } @conference {eichelbaum2010c, title = {Visualization of Effective Connectivity of the Brain}, booktitle = {Proceedings of the 15th International Workshop on Vision, Modeling and Visualization (VMV) Workshop 2010}, year = {2010}, pages = {155-162}, abstract = {Diffusion tensor images and higher-order diffusion images are the foundation for neuroscience researchers who are trying to gain insight into the connectome, the wiring scheme of the brain. Although modern imaging devices allow even more detailed anatomical measurements, these pure anatomical connections are not sufficient for understanding how the brain processes external stimuli. Anatomical connections constraint the causal influences between several areas of the brain, as they mediate causal influence between them. Therefore, neuroscientists developed models to represent the causal coherence between several pre-defined areas of the brain, which has been measured using fMRI, MEG, or EEG. The dynamic causal modeling (DCM) technique is one of these models and has been improved to use anatomical connection as informed priors to build the effective connectivity model. In this paper, we present a visualization method allowing neuroscientists to perceive both, the effective connectivity and the underlying anatomical connectivity in an intuitive way at the same time. The metaphor of moving information packages is used to show the relative intensity of information transfer inside the brain using a GPU based animation technique. We provide an interactive way to selectively view one or multiple effective connections while conceiving their anatomical connectivity. Additional anatomical context is supplied to give further orientation cues.}, author = {Eichelbaum, Sebastian and Alexander Wiebel and Mario Hlawitschka and Anwander, A. and Thomas R. Kn{\"o}sche and Gerik Scheuermann}, editor = {Reinhard Koch and Andreas Kolb and Christof Rezk-Salama} } @article { JHH*:2010, title = {Visualization of Graph Products}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {16}, number = {6}, year = {2010}, pages = {1082-1089}, author = {J{\"a}nicke, Stefan and Heine, C. and Hellmuth, M. and Stadler, PeterF. and Gerik Scheuermann} } @conference { SHH*:2010, title = {Visualizing White Matter Fiber Tracts with Optimally Fitted Curved Dissection Surfaces}, booktitle = {Proceedings of the Eurographics Workshop on Visual Computing for Biomedicine, VCBM 2010}, year = {2010}, pages = {41-48}, publisher = {Eurographics Association}, organization = {Eurographics Association}, author = {Ralph Schurade and Mario Hlawitschka and Bernd Hamann and Gerik Scheuermann and Thomas R. Kn{\"o}sche and Anwander, A.}, editor = {Bartz, Dirk and Botha, C. and Hornegger, J. and Machiraju, R. and Alexander Wiebel and Preim, B.} } @article { RKJ*:2010, title = {Visuelle Textanalyse - Interaktive Exploration von semantischen Inhalten}, journal = {Informatik Spektrum}, volume = {33}, number = {6}, year = {2010}, pages = {601-611}, author = {Rohrdantz, C. and Koch, S. and Jochim, C. and Heyer G. and Gerik Scheuermann and Ertl, T. and Sch{\"u}tze, H. and Keim, D.} } @article { CEH*:2009, title = {Data, Information, and Knowledge in Visualization}, journal = {IEEE Computer Graphics and Applications}, volume = {29}, number = {1}, year = {2009}, pages = {12-19}, author = {Chen, M. and Ebert D.S. and Hans Hagen and Laramee, R.S. and van Liere, R. and Ma, K.-L. and Ribarsky, W. and Gerik Scheuermann and Silver, D. and Knowledge in Visualization} } @inbook { WTS:2009, title = {Extraction of Separation Manifolds using Topological Structures in Flow Cross Sections}, booktitle = {Topology-Based Methods in Visualization II}, year = {2009}, pages = {31-44}, publisher = {Springer}, organization = {Springer}, address = {Berlin, Germany}, author = {Alexander Wiebel and Tricoche, X. and Gerik Scheuermann}, editor = {Hege, H.-C. and Polthier, K. and Gerik Scheuermann} } @conference { WGH*:2009, title = {FAnToM - Lessons Learned from Design, Implementation, Administration, and Use of a Visualization System for Over 10 Years}, booktitle = {Refactoring Visualization from Experience (ReVisE) 2009}, year = {2009}, note = {co-located with IEEE Visualization 2009}, month = {October}, address = {Atlantic City, NJ, USA}, author = {Alexander Wiebel and Garth, C. and Mario Hlawitschka and Wischgoll, T. and Gerik Scheuermann} } @inbook { SS:2009, title = {Flow Structure based 3D Streamline Placement}, booktitle = {Topology-Based Methods in Visualization II}, year = {2009}, pages = {31-44}, publisher = {Springer}, organization = {Springer}, address = {Berlin, Germany}, author = {Salzbrunn, T. and Gerik Scheuermann}, editor = {Hege, H.-C. and Polthier, K. and Gerik Scheuermann} } @inbook { HWA*:2009, title = {Interactive Volume Rendering of Diffusion Tensor Data}, booktitle = {Visualization and Processing of Tensor Fields: Advances and Perspectives}, year = {2009}, pages = {161-176}, publisher = {Springer}, organization = {Springer}, address = {Berlin, Germany}, author = {Mario Hlawitschka and Weber, G.H. and Anwander, A. and Carmichael, O.T. and Bernd Hamann and Gerik Scheuermann}, editor = {Laidlaw, David H. and Weickert, J.} } @conference { BJH*:2009, title = {Multimodal Visualization of DTI and fMRI Data Using Illustrative Methods}, booktitle = {Bildverarbeitung f{\"u}r die Medizin 2009}, year = {2009}, pages = {6-10}, publisher = {Springer}, organization = {Springer}, author = {Born, Silvia and Jainek, Werner and Mario Hlawitschka and Gerik Scheuermann and Tantakis, C. and Meixensberger, J. and Bartz, Dirk} } @conference { RHR*:2009, title = {A Novel Grid-Based Visualization Approach for Metabolic Networks with Advanced Focus\&Context View}, booktitle = {Proceedings of the 17th International Symposium on Graph Drawing (GD {\textquoteright}09)}, year = {2009}, pages = {268-279}, publisher = {Springer}, organization = {Springer}, author = {Rohrschneider, M. and Heine, C. and Andr{\'e} Reichenbach and Kerren, Andreas and Gerik Scheuermann} } @article { SWS:2009, title = {Smooth Stream Surfaces of 4th Order Precision}, journal = {Computer Graphics Forum}, volume = {28}, number = {3}, year = {2009}, pages = {871-878}, author = {Schneider, D. and Alexander Wiebel and Gerik Scheuermann} } @article { JG:2009, title = {Steady Visualization of the Dynamics in Fluids Using epsilon-Machines}, journal = {Computers and Graphics}, volume = {33}, number = {5}, year = {2009}, pages = {597-606}, author = {J{\"a}nicke, H. and Gerik Scheuermann} } @book { HPS:2009, title = {Topology-Based Methods in Visualization II}, year = {2009}, publisher = {Springer}, organization = {Springer}, address = {Berlin}, isbn = {978-3-540-88605-1}, editor = {Hege, H.-C. and Polthier, K. and Gerik Scheuermann} } @article { JBM*:2009, title = {Visual Exploration of Climate Variability Changes Using Wavelet Analysis}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {15}, number = {6}, year = {2009}, pages = {1375-1382}, author = {J{\"a}nicke, H. and B{\"o}ttinger, M. and Mikolajewicz, U. and Gerik Scheuermann} } @article { THS*:2009, title = {Visualisierung von Bedeutungsverschiebungen in gro{\ss}en diachronen Dokumentkollektionen}, journal = {Datenbank-Spektrum}, volume = {31}, year = {2009}, pages = {33-39}, author = {Teresniak, S. and Heyer, G. and Gerik Scheuermann and Holz, F.} } @article { JBT*:2008, title = {Automatic Detection and Visualization of Distinctive Structures in 3D Unsteady Multi-Fields}, journal = {Computer Graphics Forum}, volume = {27}, number = {3}, year = {2008}, pages = {767-774}, author = {J{\"a}nicke, H. and B{\"o}ttinger, M. and Tricoche, X. and Gerik Scheuermann} } @article { JBS:2008, title = {Brushing of Attribute Clouds for the Visualization of Multivariate Data}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {14}, number = {6}, year = {2008}, pages = {1459-1466}, author = {J{\"a}nicke, H. and B{\"o}ttinger, M. and Gerik Scheuermann} } @conference { BHW*:2008, title = {Design und Anwendung einer multimodalen Visualisierung morphologischer und funktioneller Daten}, booktitle = {Tagungsband der 7. Jahrestagung der Deutschen Gesellschaft f{\"u}r Computer- und Roboterassistierte Chirurgie e.V.}, year = {2008}, pages = {81ff.}, publisher = {CURAC}, organization = {CURAC}, author = {Born, Silvia and Mario Hlawitschka and Wellein, Daniela and Trantakis, C. and Gerik Scheuermann and K{\"u}hn, A. and Bartz, Dirk}, editor = {Bartz, Dirk and Bohn, Stefan and Hoffmann, J.} } @conference { HS:2008, title = {Direkte Darstellung von Faserinformation durch Koh{\"a}renzma{\ss}e}, booktitle = {Tagungsband der 7. Jahrestagung der Deutschen Gesellschaft f{\"u}r Computer- und Roboterassistierte Chirurgie e.V.}, year = {2008}, pages = {73ff.}, publisher = {CURAC}, organization = {CURAC}, author = {Mario Hlawitschka and Gerik Scheuermann}, editor = {Bartz, Dirk and Bohn, Stefan and Hoffmann, J.} } @conference {hlawitschka2008c, title = {Fast and Memory Efficient {GPU}-based Rendering of Tensor Data}, booktitle = {Proceedings of the IADIS International Conference on Computer Graphics and Visualization 2008}, year = {2008}, pages = {36-42}, abstract = {Graphics hardware is advancing very fast and offers new possibilities to programmers. The new features can be used in scientific visualization to move calculations from the CPU to the graphics processing unit (GPU). This is useful especially when mixing CPU intense calculations with on the fly visualization of intermediate results. We present a method to display a large amount of superquadric glyphs and demonstrate its use for visualization of measured second{\textendash}order tensor data in diffusion tensor imaging (DTI) and to stress and strain tensors of computational fluid dynamic and material simulations.}, author = {Mario Hlawitschka and Eichelbaum, Sebastian and Gerik Scheuermann} } @article { SWC*:2008, title = {Interactive Comparison of Scalar Fields Based on Largest Contours with Applications to Flow Visualization}, journal = {IEEE Transaction on Visualization and Computer Graphics}, volume = {14}, number = {6}, year = {2008}, pages = {1475-1482}, author = {Schneider, D. and Alexander Wiebel and Carr, Hamish and Mario Hlawitschka and Gerik Scheuermann} } @article {499, title = {Lagrangian Visualization of Flow-Embedded Surface Structures}, journal = {Computer Graphics Forum}, volume = {27}, year = {2008}, pages = {774}, chapter = {767}, author = {Garth, C. and Alexander Wiebel and Tricoche, X. and Joy, K. and Gerik Scheuermann} } @article { SGS*:2008, title = {Pathline Predicates and Unsteady Flow Structures}, journal = {The Visual Computer}, volume = {24}, number = {12}, year = {2008}, pages = {1039-1051}, author = {Salzbrunn, T. and Garth, C. and Gerik Scheuermann and Meyer, J.} } @conference { SJW*:2008, title = {The State of the Art in Flow Visualization: Partition-based Techniques}, booktitle = {Simulation and Visualization 2008}, year = {2008}, pages = {75-92}, publisher = {SCS Publishing House}, organization = {SCS Publishing House}, author = {Salzbrunn, T. and J{\"a}nicke, H. and Wischgoll, T. and Gerik Scheuermann}, editor = {Hauser, H. and Strassburger, S. and Theisel, H.} } @conference { GRH*:2008, title = {Tapping Huge Temporally Indexed Textual Resources with WCTAnalyze}, booktitle = {Proceedings of the LREC 2008}, year = {2008}, publisher = {European Language Resources Association (ELRA)}, organization = {European Language Resources Association (ELRA)}, address = {Marrakech, Morocco}, author = {Gottwald, S. and Richter, M. and Heyer, G. and Gerik Scheuermann} } @article { WGS:2007, title = {Computation of Localized Flow for Steady and Unsteady Vector Fields and its Applications}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {13}, number = {4}, year = {2007}, pages = {641-651}, author = {Alexander Wiebel and Garth, C. and Gerik Scheuermann} } @conference { SWS:2007, title = {Efficient Construction of Flow Structures}, booktitle = {IASTED VIIP 2007 Proceedings}, year = {2007}, pages = {135-140}, publisher = {IASTED}, organization = {IASTED}, author = {Sazbrunn, T. and Alexander Wiebel and Gerik Scheuermann} } @article { WTS*:2007, title = {Generalized Streak Lines: Analysis and Visualization of Boundary Induced Vortices}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {13}, number = {6}, year = {2007}, pages = {1735-1742}, author = {Alexander Wiebel and Tricoche, X. and Schneider, D. and J{\"a}nicke, H. and Gerik Scheuermann} } @conference { HSH:2007, title = {Interactive Glyph Placement for Tensor Fields}, booktitle = {Advances in Visual Computing, 3rd International Symposium (ISVC)}, series = {Lecture Notes in Computer Science}, year = {2007}, pages = {331-340}, publisher = {Springer}, organization = {Springer}, author = {Mario Hlawitschka and Gerik Scheuermann and Bernd Hamann} } @conference { HS:2007b, title = {Manual Clustering Refinement using Interaction with Blobs}, booktitle = {Eurovis 2007 Proceedings}, year = {2007}, pages = {59-66}, publisher = {Eurographics Association}, organization = {Eurographics Association}, address = {Aire-la-Ville, Switzerland}, author = {Heine, C. and Gerik Scheuermann}, editor = {Museth, K. and M{\"o}ller, T. and Ynnerman, A.} } @article { JWS*:2007, title = {Multifield Visualization Using Local Statistical Complexity}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {13}, number = {6}, year = {2007}, pages = {1384-1391}, author = {J{\"a}nicke, H. and Alexander Wiebel and Gerik Scheuermann and Kollmann, W.} } @conference { RSH*:2007, title = {Shape Characterization of Extracted and Simulated Tumor Samples using Topological and Geometric Measures}, booktitle = {IEEE Engineering in Medicine and Biology Conference 2007 Proceedings}, year = {2007}, pages = {6271-6277}, publisher = {IEEE}, organization = {IEEE}, author = {Rohrschneider, M. and Gerik Scheuermann and H{\"o}hme, S. and Drasdo, D.} } @conference { SS:2007, title = {Streamline Predicates as Flow Topology Generalization}, booktitle = {Topology-Based Methods in Visualization}, year = {2007}, pages = {65-78}, publisher = {Springer}, organization = {Springer}, address = {Berlin, Germany}, author = {Salzbrunn, T. and Gerik Scheuermann} } @conference { HSA*:2007, title = {Tensor Lines in Tensor Fields of Arbitrary Order}, booktitle = {Advances in Visual Computing, 3rd International Symposium (ISVC)}, series = {Lecture Notes in Computer Science}, year = {2007}, pages = {341-350}, publisher = {Springer}, organization = {Springer}, author = {Mario Hlawitschka and Gerik Scheuermann and Anwander, A. and Tittgemeyer, Marc and Bernd Hamann} } @conference { EWG*:2007, title = {Topology Based Flow Analysis and Superposition Effects}, booktitle = {Topology-Based Methods in Visualization}, year = {2007}, pages = {91-104}, publisher = {Springer}, organization = {Springer}, address = {Berlin, Germany}, author = {Ebling, J. and Alexander Wiebel and Garth, C. and Gerik Scheuermann} } @conference { HS:2007a, title = {Visualization of Barrier Tree Sequences Revisited}, booktitle = {Visualization in Medicine and Life Sciences}, year = {2007}, pages = {275-292}, publisher = {Springer}, organization = {Springer}, address = {Berlin, Germany}, author = {Heine, C. and Gerik Scheuermann} } @conference { ES:2006a, title = {Segmentation of Flow Fields using Pattern Matching}, booktitle = {Eurovis 2006 Proceedings}, year = {2006}, pages = {147-154+366}, publisher = {Eurographics Association}, organization = {Eurographics Association}, address = {Aire-la-Ville, Switzerland}, author = {Ebling, J. and Gerik Scheuermann} } @article { SS:2006, title = {Streamline Predicates}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {12}, number = {6}, year = {2006}, pages = {1601-1612}, author = {Salzbrunn, T. and Gerik Scheuermann} } @conference { ES:2006b, title = {Template Matching on Vector Fields using Clifford Algebra}, booktitle = {The International Conference on the Applications of Computer Science and Mathematics in Architecture and Civil Engineering (IKM 2006)}, year = {2006}, address = {Weimar, Germany}, author = {Ebling, J. and Gerik Scheuermann} } @article { HSF*:2006, title = {Visualization of Barrier Tree Sequences}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {12}, number = {5}, year = {2006}, pages = {781-788}, author = {Heine, C. and Gerik Scheuermann and Flamm, C. and Ivo L. Hofacker and Stadler, PeterF.} } @conference { PSW*:2006, title = {Visualization of Lattice-Based Protein Folding Simulations}, booktitle = {Information Visualization (IV 2006) Conference Proceedings}, year = {2006}, pages = {89-94}, publisher = {IEEE Computer Society}, organization = {IEEE Computer Society}, address = {Los Alamitos, CA, USA}, author = {P{\"o}tzsch, S. and Gerik Scheuermann and Wolfinger, M.T. and Flamm, C. and Stadler, PeterF.} } @conference { ES:2005a, title = {Analysis and Visualization of 3-C PIV Images from HART II using Image Processing Methdos}, booktitle = {Data Visualization 2005: Proceedings of EuroVis 2005}, year = {2005}, pages = {161-168}, publisher = {Eurographics Association}, organization = {Eurographics Association}, address = {Aire-la-Ville, Switzerland}, author = {Ebling, J. and Gerik Scheuermann and van der Wall, B. G.}, editor = {Brodlie, K. W. and Duke, D. J. and Joy, K.} } @inbook { ES:2005, title = {Clifford Convolution And Pattern Matching On Irregular Grids}, booktitle = {Scientific Visualization: The Visual Extraction of Knowledge from Data}, year = {2005}, pages = {231-248}, publisher = {Springer}, organization = {Springer}, address = {Heidelberg}, author = {Ebling, J. and Gerik Scheuermann}, editor = {Bonneau, G.P and Ertl, T. and Nielson, G.} } @article { ES:2005, title = {Clifford Fourier Transform on Vector Fields}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {11}, number = {4}, year = {2005}, pages = {469-479}, author = {Ebling, J. and Gerik Scheuermann} } @conference { WS:2005, title = {Eyelet Particle Tracing - Steady Visualization of Unsteady Flow}, booktitle = {IEEE Visualization 2005 Proceedings}, year = {2005}, pages = {607-614}, publisher = {IEEE Computer Society}, organization = {IEEE Computer Society}, address = {Los Alamitos, CA, USA}, author = {Alexander Wiebel and Gerik Scheuermann}, editor = {Silva, C. T. and Gr{\"o}ller, E. and Rushmeier, H.} } @inbook { TGS:2005, title = {Fast and Robust Extraction of Separation Line Features}, booktitle = {Scientific Visualization: The Visual Extraction of Knowledge from Data}, year = {2005}, pages = {249-264}, publisher = {Springer}, organization = {Springer}, address = {Heidelberg}, author = {Tricoche, X. and Garth, C. and Gerik Scheuermann}, editor = {Bonneau, G.P and Ertl, T. and Nielson, G.} } @conference { BDH*:2005, title = {Getting in Touch with a Cognitive Character}, booktitle = {WHC 2005}, year = {2005}, pages = {440-445}, author = {Bierz, T. and Peter Dannenmann and Hergenr{\"o}ther, K. and Bertram, M. and Bartel, H. and Gerik Scheuermann and Hans Hagen} } @conference { HS:2005, title = {HOT{\textendash}lines {\textendash}- Tracking Lines in Higher Order Tensor Fields}, booktitle = {IEEE Visualization 2005 Proceedings}, year = {2005}, pages = {27{\textendash}34}, publisher = {IEEE Computer Society}, organization = {IEEE Computer Society}, address = {Los Alamitos, CA, USA}, author = {Mario Hlawitschka and Gerik Scheuermann}, editor = {Silva, C. T. and Gr{\"o}ller, E. and Rushmeier, H.} } @conference { WGS:2005, title = {Localized Flow Analysis of 2D and 3D Vector Fields}, booktitle = {Data Visualization 2005: Proceedings of EuroVis 2005}, year = {2005}, pages = {143-150}, publisher = {Eurographics Association}, organization = {Eurographics Association}, address = {Aire-la-Ville, Switzerland}, author = {Alexander Wiebel and Garth, C. and Gerik Scheuermann}, editor = {Brodlie, K. W. and Duke, D. J. and Joy, K.} } @inbook { ST:2005, title = {Topological Methods in Flow Visualization}, booktitle = {The Visualization Handbook}, year = {2005}, pages = {341-358}, publisher = {Elsevier}, organization = {Elsevier}, address = {Amsterdam, NL}, author = {Gerik Scheuermann and Tricoche, X.} } @conference { TGB*:2004, title = {Accurate and Efficient Visualization of Flow Structures in a Delta Wing Simulation}, booktitle = {Proceedings of 34th AIAA Fluid Dynamics Conference and Exhibit}, year = {2004}, note = {AAIA Paper 2004-2153}, address = {Portland, OR, USA}, author = {Tricoche, X. and Garth, C. and Bobach, T. and Gerik Scheuermann and R{\"u}tten, M.} } @conference { HES:2004, title = {Convolution and Fourier Transform of Second Order Tensor Fields}, booktitle = {Proceedings of IASTED VIIP 2004}, year = {2004}, pages = {78-83}, author = {Mario Hlawitschka and Ebling, J. and Gerik Scheuermann} } @conference { ES:2004, title = {Pattern Matching on Vector Fields using Gabor Filter}, booktitle = {Proceedings of IASTED VIIP 2004}, year = {2004}, pages = {825-830}, author = {Ebling, J. and Gerik Scheuermann} } @conference { GTS*:2004, title = {Surface Techniques for Vortex Visualization}, booktitle = {Data Visualization 2004 (Proc. of EUROGRAPHICS/IEEE TCVG Symposium on Visualization 2004)}, year = {2004}, pages = {155-164}, publisher = {Eurographics Association}, organization = {Eurographics Association}, address = {Aire-la-Ville, Switzerland}, author = {Garth, C. and Tricoche, X. and Salzbrunn, T. and Bobach, T. and Gerik Scheuermann}, editor = {Deussen, O. and Hansen, C. and Keim, D. and Saupe, D.} } @article { WS:2004, title = {Textur- und topologiebasierte Vektorfeldvisualisierung}, journal = {Information Technology}, volume = {46}, number = {3}, year = {2004}, pages = {111-117}, author = {Weiskopf, D. and Gerik Scheuermann} } @article { MBSHJ:2004, title = {Topological Segmentation of Three-Dimensional Vector Fields}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {10}, number = {2}, year = {2004}, pages = {198-205}, author = {Mahrous, K. and Bennett, J. and Gerik Scheuermann and Bernd Hamann and Joy, K.} } @conference { GTS:2004, title = {Tracking of Vector Field Singularities in Unstructured 3D Time-Dependent Datasets}, booktitle = {IEEE Visualization 2004 Proceedings}, year = {2004}, pages = {329-336}, publisher = {IEEE Computer Society}, organization = {IEEE Computer Society}, address = {Los Alamitos, CA, USA}, author = {Garth, C. and Tricoche, X. and Gerik Scheuermann} } @conference { TGG*:2004, title = {Visualization of Intricate Flow Structures for Vortex Breakdown Analysis}, booktitle = {IEEE Visualization 2004 Proceedings}, year = {2004}, pages = {187-194}, publisher = {IEEE Computer Society}, organization = {IEEE Computer Society}, address = {Los Alamitos, CA, USA}, author = {Tricoche, X. and Garth, C. and Kindlmann, G. and Deines, E. and Gerik Scheuermann and R{\"u}tten, M. and Hansen, C.} } @conference { WS:2003b, title = {3D Loop Detection and Visualization in Vector Fields}, booktitle = {Visualization and Mathematics III}, year = {2003}, pages = {151-162}, publisher = {Springer}, organization = {Springer}, address = {Berlin, Germany}, author = {Wischgoll, T. and Gerik Scheuermann}, editor = {Hege, H.-C. and Polthier, K.} } @conference { ES:2003a, title = {Clifford Convolution and Pattern Matching on Vector Fields}, booktitle = {IEEE Visualization 2003 Proceedings}, year = {2003}, pages = {193-200}, publisher = {IEEE Computer Society}, organization = {IEEE Computer Society}, address = {Los Alamitos, CA, USA}, author = {Ebling, J. and Gerik Scheuermann} } @conference { WSH:2003, title = {Detecting Critical Regions In Scalar Fields}, booktitle = {Data Visualization (Proceedings of Vissym) 2003}, year = {2003}, pages = {85-94}, author = {Weber, G.H. and Gerik Scheuermann and Bernd Hamann}, editor = {Bonneau, G.P and Hahmann, S. and Hansen, C.} } @conference { LST:2003, title = {An Efficient Point Location Method for Visualization in Large Unstructured Grids}, booktitle = {Vision, Modeling, and Visualization 2003}, year = {2003}, pages = {27-36}, publisher = {IOS Press}, organization = {IOS Press}, author = {Langbein, M. and Gerik Scheuermann and Tricoche, X.}, editor = {Ertl, T. and Girod, B. and Greiner, G. and Niemann, H. and Seidel, H.-P. and Steinbach, E. and Westermann, R.} } @conference { SKTW:2003, title = {Evolution of Topology in Axi-Symmetric and 3-D Viscous Flow}, booktitle = {Proceedings of Halfmoon Bay Conference 2001}, year = {2003}, pages = {622-643}, publisher = {World Scientific Publishing}, organization = {World Scientific Publishing}, address = {New Jersey, NJ, USA}, author = {Gerik Scheuermann and Kollmann, W. and Tricoche, X. and Wischgoll, T.}, editor = {Hafez, M.M.} } @inbook { WBJ*:2003, title = {Hierarchical Spline Approximations}, booktitle = {Hierarchical and Geometrical Methods in Scientific Visualization}, year = {2003}, pages = {63-88}, publisher = {Springer}, organization = {Springer}, address = {Berlin, Germany}, author = {Wiley, D.F. and Bertram, M. and Jordan, B.W. and Bernd Hamann and Joy, K. and Max, N.L. and Gerik Scheuermann}, editor = {Farin, G. and Bernd Hamann and Hans Hagen} } @inbook { SHJ*:2003, title = {Localizing vector field topology}, booktitle = {Data Visualization - The State of the Art}, year = {2003}, pages = {19-35}, publisher = {Kluwer Academic Publisher}, organization = {Kluwer Academic Publisher}, address = {Boston, MA, USA}, author = {Gerik Scheuermann and Bernd Hamann and Joy, K. and Kollmann, W.}, editor = {Post, F.H. and Nielson, G. and Bonneau, G.P} } @conference { WOK*:2003, title = {Parallel Cell Projection Rendering of Adaptive Mesh Refinement Data}, booktitle = {IEEE Symposium on Parallel Visualization and Graphics Symposium 2003}, year = {2003}, pages = {51-60}, publisher = {IEEE Computer Society}, organization = {IEEE Computer Society}, address = {Los Alamitos, cA, USA}, author = {Weber, G.H. and {\"O}hler, M. and Kreylos, O. and Shalf, J.M. and Bethel, E.W. and Bernd Hamann and Gerik Scheuermann} } @conference { WS:2003, title = {Parallel Computation of the Topological Skeleton of Vector Fields}, booktitle = {High Performance Computing 2003}, year = {2003}, pages = {139-144}, author = {Wischgoll, T. and Gerik Scheuermann}, editor = {Banicescu, I.} } @inbook { TSH:2003, title = {Scaling the Topology of Symmetric Second Order Tensor Fields}, booktitle = {Hierarchical and Geometrical Methods in Scientific Visualization}, year = {2003}, pages = {171-184}, publisher = {Springer}, organization = {Springer}, address = {Berlin, Germany}, author = {Tricoche, X. and Gerik Scheuermann and Hans Hagen}, editor = {Farin, G. and Bernd Hamann and Hans Hagen} } @inbook { TS:2003, title = {Topology Simplification of Symmetric, Second-Order 2D Tensor Fields}, booktitle = {Geometric Modeling Methods in Scientific Visualization}, year = {2003}, pages = {171-184}, publisher = {Springer}, organization = {Springer}, address = {Berlin, Germany}, author = {Tricoche, X. and Gerik Scheuermann}, editor = {Bernd Hamann and M{\"u}ller, H. and Hans Hagen} } @conference { WSH:2002b, title = {Distributed Computation of Planar Closed Streamlines}, booktitle = {SPIE Conference on Visualization and Data Analysis 2002}, year = {2002}, pages = {238-245}, publisher = {SPIE}, organization = {SPIE}, address = {San Jose, CA, USA}, author = {Wischgoll, T. and Gerik Scheuermann and Hans Hagen}, editor = {Erbacher, R.F. and Chen, P. and Gr{\"o}hn, M. and Roberts, J.C. and Wittenbrink, C.M.} } @conference { WSH:2002, title = {Exploring Scalar Fields Using Critical Isovalues}, booktitle = {IEEE Visualization 2002 Proceedings}, year = {2002}, pages = {171-178}, publisher = {IEEE Computer Society}, organization = {IEEE Computer Society}, address = {Los Alamitos, CA, USA}, author = {Weber, G.H. and Gerik Scheuermann and Hans Hagen}, editor = {Moorhead, R. and Gross, M. and Joy, K.} } @conference { WS:2002, title = {Locating Closed Streamlines in 3D}, booktitle = {Data Visualization 2002 (Proceedings of Vissym 2002)}, year = {2002}, pages = {227-232+280}, publisher = {ACM}, organization = {ACM}, address = {New York, NY, USA}, author = {Wischgoll, T. and Gerik Scheuermann}, editor = {Ebert, D. and Brunet, P. and Navazo, I.} } @article { JSF*:2002, title = {Tensor Visualizations in Computational Geomechanics}, journal = {International Journal for Numerical and Analytical Methods in Geomechanics}, volume = {26}, year = {2002}, pages = {925-944}, author = {Jeremic, B. and Gerik Scheuermann and Frey, J. and Yang, Z. and Bernd Hamann and Joy, K. and Hans Hagen} } @article { TWS*:2002, title = {Topology Tracking for the Visualization of Time-Dependent Two-Dimensional Flows}, journal = {Computers and Graphics}, volume = {26}, year = {2002}, pages = {249-252}, author = {Tricoche, X. and Wischgoll, T. and Gerik Scheuermann and Hans Hagen} } @conference { WS:2002, title = {Topology-based Transfer Function Design}, booktitle = {Proceedings of the 2nd IASTED International Conference on Visualization, Imaging, and Image Processing (VIIP) 2002}, year = {2002}, pages = {527-537}, publisher = {ACTA Press}, organization = {ACTA Press}, address = {Anaheim, CA, USA}, author = {Weber, G.H. and Gerik Scheuermann} } @inbook { SH:2002, title = {Vector and Tensor Visualization}, booktitle = {Handbook of Computer Aided Geometric Design}, year = {2002}, pages = {683-700}, publisher = {Elsevier}, organization = {Elsevier}, address = {Amsterdam}, author = {Gerik Scheuermann and Hans Hagen}, editor = {Farin, G. and Hoschek, J. and Kim, M.-S.} } @conference { SH:2001, title = {Clifford Algebra and Flows}, booktitle = {Mathematical Methods for Curves and Surfaces}, year = {2001}, pages = {173-181}, publisher = {Vanderbilt University Press}, organization = {Vanderbilt University Press}, address = {Nashville, TN, USA}, author = {Gerik Scheuermann and Hans Hagen}, editor = {Lyche, T. and Schumaker, L. L.} } @conference { TSH:2001d, title = {Continuous Topology Simplification of Planar Vector Fields}, booktitle = {IEEE Visualization 2001}, year = {2001}, pages = {159 {\textendash} 166}, publisher = {IEEE Computer Society}, organization = {IEEE Computer Society}, address = {Los Alamitos, CA, USA}, author = {Tricoche, X. and Gerik Scheuermann and Hans Hagen}, editor = {Ertl, T. and Joy, K. and Varshney, A.} } @article { WS:2001, title = {Detection and Visualization of Closed Streamlines in Planar Flows}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {7}, number = {2}, year = {2001}, pages = {165 {\textendash} 172}, author = {Wischgoll, T. and Gerik Scheuermann} } @conference { WSH:2001, title = {Parallel Detection of Closed Streamlines in Planar Flows}, booktitle = {Proceedings of IASTED VIIP 2001}, year = {2001}, pages = {84-88}, publisher = {ACTA Press}, organization = {ACTA Press}, address = {Anaheim, CA, USA}, author = {Wischgoll, T. and Gerik Scheuermann and Hans Hagen}, editor = {Hanza, M.H.} } @article { TSH:2001c, title = {Tensor Topology Tracking}, journal = {Computer Graphics Forum}, volume = {20}, number = {3}, year = {2001}, note = {EUROGRAPHICS 2001}, pages = {461 {\textendash} 470}, author = {Tricoche, X. and Gerik Scheuermann and Hans Hagen} } @conference { SBH*:2001, title = {A Tetrahedra-Based Stream Surface Algorithm}, booktitle = {IEEE Visualization 2001}, year = {2001}, pages = {151-158}, publisher = {IEEE Computer Society}, organization = {IEEE Computer Society}, address = {Los Alamitos, CA, USA}, author = {Gerik Scheuermann and Bobach, T. and Hans Hagen and Mahrous, K. and Bernd Hamann and Joy, K. and Kollmann, W.}, editor = {Ertl, T. and Joy, K. and Varshney, A.} } @conference { TSH:2001b, title = {Topology-Based Visualization of Time-Dependent 2D Vector Fields}, booktitle = {Data Visualization 2001}, year = {2001}, pages = {117 {\textendash} 126}, publisher = {Springer}, organization = {Springer}, address = {Wien}, author = {Tricoche, X. and Gerik Scheuermann and Hans Hagen}, editor = {Ebert, D. and Favre, J. M. and Ronny Peikert} } @conference { WSH:2001, title = {Tracking Closed Streamlines in Time-Dependent Planar Flows}, booktitle = {Vision, Modeling, and Visualization 2001}, year = {2001}, pages = {447 {\textendash} 454}, publisher = {Aka}, organization = {Aka}, address = {Berlin}, author = {Wischgoll, T. and Gerik Scheuermann and Hans Hagen}, editor = {Ertl, T. and Girod, B. and Niemann, H. and Seidel, H.-P.} } @conference { TSH:2001a, title = {Vector and Tensor Field Topology Simplification on Irregular Grids}, booktitle = {Data Visualization 2001}, year = {2001}, pages = {107 {\textendash} 116}, publisher = {Springer}, organization = {Springer}, address = {Wien}, author = {Tricoche, X. and Gerik Scheuermann and Hans Hagen}, editor = {Ebert, D. and Favre, J. M. and Ronny Peikert} } @conference { SFH*:2001, title = {Visualization of Seismic Soils Structure Simulations}, booktitle = {Proceedings of IASTED VIIP 2001}, year = {2001}, pages = {78-83}, publisher = {ACTA Press}, organization = {ACTA Press}, address = {Anaheim, CA, USA}, author = {Gerik Scheuermann and Frey, J. and Hans Hagen and Bernd Hamann and Jeremic, B. and Joy, K.}, editor = {Hanza, M.H.} } @conference { TSH:2000b, title = {Higher Order Singularities in Piecewise Linear Vector Fields}, booktitle = {The Mathematics of Surfaces IX}, year = {2000}, pages = {99-113}, publisher = {Springer}, organization = {Springer}, address = {London, GB}, author = {Tricoche, X. and Gerik Scheuermann and Hans Hagen}, editor = {Cipolla, R. and Martin, R.} } @inbook { HEL*:2000, title = {Scientific Visualization - Methods and Applications}, booktitle = {Informatics - 10 Years Back - 10 Years Ahead}, year = {2000}, note = {Lecture Notes 2000}, pages = {311-327}, publisher = {Springer}, organization = {Springer}, address = {Berlin, Germany}, author = {Hans Hagen and Ebert, A. and van Lengen, R.H. and Gerik Scheuermann} } @inbook { Sch:2000, title = {Topological Vector Field Visualization with Clifford Algebra}, booktitle = {Ausgezeichnete Informatikdissertationen 1999}, year = {2000}, pages = {213-222}, publisher = {Gesellschaft f{\"u}r Informatik}, organization = {Gesellschaft f{\"u}r Informatik}, author = {Gerik Scheuermann} } @conference { TSH:2000, title = {A Topology Simplification Method for 2D Vector Fields}, booktitle = {IEEE Visualization 2000}, year = {2000}, pages = {359 {\textendash} 366}, address = {Los Alamitos, CA}, author = {Tricoche, X. and Gerik Scheuermann and Hans Hagen} } @inbook { SHK:2000, title = {Visualizing Critical Points of Arbitrary Poincare Index}, booktitle = {Scientific Visualization - Dagstuhl {\textquoteright}97}, year = {2000}, pages = {277-283}, publisher = {IEEE Computer Society Press}, organization = {IEEE Computer Society Press}, address = {Los Alamitos, CA, USA}, author = {Gerik Scheuermann and Hans Hagen and Kr{\"u}ger, H.}, editor = {Hans Hagen and Nielson, G. and Post, F.H.} } @article { SHJK:2000, title = {Visualizing Local Vector Field Topology}, journal = {Journal of Electronic Imaging}, volume = {9}, number = {4}, year = {2000}, pages = {356 {\textendash} 367}, author = {Gerik Scheuermann and Bernd Hamann and Joy, K. and Kollmann, W.} } @conference { STH:1999, title = {C1-Interpolation for Vector Field Topology Visualization}, booktitle = {Proceedings of IEEE Visualization {\textquoteright}99}, year = {1999}, pages = {271-278}, publisher = {IEEE Computer Society Press}, organization = {IEEE Computer Society Press}, address = {Los Alamitos, CA, USA}, author = {Gerik Scheuermann and Tricoche, X. and Hans Hagen}, editor = {Ebert, D. and Gross, M. and Bernd Hamann} } @mastersthesis { Sch:1999, title = {Topological Vector Field Visualization with Clifford Algebra}, year = {1999}, school = {University of Kaiserslautern}, type = {phd}, address = {Kaiserslautern, Germany} year = {1999}, author = {Gerik Scheuermann} } @inbook { Sch:1999b, title = {Visualisierung von Vektor- und Tensorfeldern}, booktitle = {Effiziente Methoden der geometrischen Modellierung und wissenschaftlichen Visualisierung}, year = {1999}, pages = {172-196}, publisher = {Teubner}, organization = {Teubner}, address = {Stuttgart, Germany}, author = {Gerik Scheuermann}, editor = {Hans Hagen and Brunnett, G. and M{\"u}ller, H. and Roller, D.} } @conference { FSM*:1999, title = {Visualization of Grinding Processes}, booktitle = {Data Visualization {\textquoteright}99 (Proceedings of Vissym{\textquoteright}99)}, year = {1999}, pages = {253-260}, publisher = {Springer}, organization = {Springer}, address = {Vienna, Austria}, author = {Fiege, M. and Gerik Scheuermann and M{\"u}nchhofen, M. and Hans Hagen}, editor = {Gr{\"o}ller, E. and L{\"o}ffelmann, H. and Ribarsky, W.} } @inbook { SW:1999, title = {Visualization of Temporal Distances}, booktitle = {Late Breaking Hot Topics of IEEE Symposium on Information Visualization{\textquoteright}99}, year = {1999}, pages = {43-46}, publisher = {IEEE Computer Society Press}, organization = {IEEE Computer Society Press}, address = {Los Alamitos, CA, USA}, author = {Gerik Scheuermann and Wischgoll, T.} } @conference { SBH:1999, title = {Visualizing Planar Vector Fields with Normal Component}, booktitle = {Proceedings of IEEE Visualization {\textquoteright}99}, year = {1999}, pages = {255-262}, publisher = {IEEE Computer Society Press}, organization = {IEEE Computer Society Press}, address = {Los Alamitos, CA, USA}, author = {Gerik Scheuermann and Burbach, H. and Hans Hagen}, editor = {Ebert, D. and Gross, M. and Bernd Hamann} } @conference { SHK:1998c, title = {Clifford Algebra in Vector Field Visualization}, booktitle = {Mathematical Visualization}, year = {1998}, pages = {343-351}, publisher = {Springer}, organization = {Springer}, address = {Heidelberg, Germany}, author = {Gerik Scheuermann and Hans Hagen and Kr{\"u}ger, H.}, editor = {Hege, H.-C. and Polthier, K.} } @conference { SH:1998, title = {A Data Dependent Triangulation for Vector Fields}, booktitle = {Proceedings of Computer Graphics International 1998}, year = {1998}, pages = {96-102}, publisher = {IEEE Computer Society Press}, organization = {IEEE Computer Society Press}, address = {Los Alamitos, CA, USA}, author = {Gerik Scheuermann and Hans Hagen}, editor = {Wolter, F.-E., Patrikalakis, N.} } @conference { SHK:1998, title = {An Interesting Class of Polynomial Vector Fields}, booktitle = {Mathematical Methods for Curves and Surfaces II}, year = {1998}, pages = {429{\textendash}436}, address = {Nashville, TN, USA}, author = {Gerik Scheuermann and Hans Hagen and Kr{\"u}ger, H.}, editor = {D{\ae}hlen, M. and Lyche, T. and Schumaker, L. L.} } @conference { SHK:1998b, title = {Vector Field Topology with Clifford Algebra}, booktitle = {Proceedings of WSCG{\textquoteright}98}, year = {1998}, pages = {347-353}, publisher = {University of West Bohemia}, organization = {University of West Bohemia}, author = {Gerik Scheuermann and Hans Hagen and Kr{\"u}ger, H.} } @article { SKMR:1998, title = {Visualizing Nonlinear Vector Field Topology}, journal = {IEEE Transactions on Visualization and Computer Graphics}, volume = {4}, number = {2}, year = {1998}, month = {April{\textendash}June}, pages = {109{\textendash}116}, author = {Gerik Scheuermann and Kr{\"u}ger, H. and Menzel, M. and Rockwood, A.} } @conference { SHKMR:1997, title = {Visualization of Higher Order Singularities in Vector Fields}, booktitle = {IEEE Visualization {\textquoteleft}97}, year = {1997}, pages = {67 {\textendash} 74}, address = {Los Alamitos}, author = {Gerik Scheuermann and Hans Hagen and Kr{\"u}ger, H. and Menzel, M. and Rockwood, A.} }